IBI: Tobias Knopp (Head of Institute)

IBI > People > Tobias Knopp (Head of Institute)

Prof. Dr.-Ing. Tobias Knopp

Universitätsklinikum Hamburg-Eppendorf (UKE)
Sektion für Biomedizinische Bildgebung
Lottestraße 55
2ter Stock, Raum 209
22529 Hamburg
- Postanschrift -

Technische Universität Hamburg (TUHH)
Institut für Biomedizinische Bildgebung
Gebäude E, Raum 4.044
Am Schwarzenberg-Campus 3
21073 Hamburg

Tel.: 040 / 7410 56794
Fax: 040 / 7410 45811
E-Mail: t.knopp(at)uke.de
E-Mail: tobias.knopp(at)tuhh.de
ORCID: https://orcid.org/0000-0002-1589-8517

Roles

Head of the Institute for Biomedical Imaging
Editor-in-chief of the International Journal on Magnetic Particle Imaging (IJMPI)

Consulting Hours

On appointment

Research Interests

Tomographic Imaging
Image Reconstruction
Signal- and Image Processing
Magnetic Particle Imaging

Curriculum Vitae

Tobias Knopp received his Diplom degree in computer science in 2007 and his PhD in 2010, both from the University of Lübeck with highest distinction. For his PHD on the tomographic imaging method Magnetic Particle Imaging (MPI) he was awarded with the Klee award from the DGBMT (VDE) in 2011. From 2010 until 2011 he led the MAPIT project at the University of Lübeck and published the first scientific book on MPI. In 2011 he joined Bruker Biospin to work on the first commercially available MPI system. From 2012 until 2014 he worked at Thorlabs in the field of Optical Coherence Tomography (OCT) as a software developer. In 2014 he has been appointed as Professor for experimental Biomedical Imaging at the University Medical Center Hamburg-Eppendorf and the Hamburg University of Technology.

Journal Publications

83
Szwargulski, P.; Wilmes, M.; Javidi, E.; Thieben, F.; Graeser, M.; Koch, M.; Gruettner, C.; Adam, G.; Gerhard, C.; Magnus, T.; Knopp, T.; Ludewig, P.
Monitoring Intracranial Cerebral Hemorrhage Using Multicontrast Real-Time Magnetic Particle Imaging
2020 Article ACS Nano
Journal ACS Nano, 14 (10): 13913-13923
Publisher Future Medicine Ltd
DOI:
10.1021/acsnano.0c06326
82
Weller, D.; Salamon, J.; Frölich, A.; Möddel, M.; Knopp, T.; Werner, R.
Combining Direct 3D Volume Rendering and Magnetic Particle Imaging to Advance Radiation-Free Real-Time 3D Guidance of Vascular Interventions
2020 Article Cardiovascular and interventional radiology
Journal Cardiovascular and interventional radiology, 43 (2): 322-330
Publisher Springer US
DOI:
10.1007/s00270-019-02340-4
81
Griese, F.; Latus, S.; Schlüter, M.; Graeser, M.; Lutz, M.; Schlaefer, A.; Knopp, T.
In-Vitro MPI-guided IVOCT catheter tracking in real time for motion artifact compensation
2020 Article Plos one
Journal Plos one, 20 (3): e0230821
Publisher Public Library of Science
DOI:
10.1371/journal.pone.0230821
80
Griese, F.; Knopp, T.; Gruettner, C.; Thieben, F.; Müller, K.; Loges, S.; Ludewig, P.; Gdaniec, N.
Simultaneous Magnetic Particle Imaging and Navigation of large superparamagnetic nanoparticles in bifurcation flow experiments
2020 Article Journal of Magnetism and Magnetic Materials
Journal Journal of Magnetism and Magnetic Materials, 498 : 166206
DOI:
10.1016/j.jmmm.2019.166206
79
Knopp, T.; Szwargulski, P.; Griese, F.; Graeser, M.
OpenMPIData: An initiative for freely accessible magnetic particle imaging data
2020 Article Data in Brief
Journal Data in Brief, 28 : 104971
DOI:
10.1016/j.dib.2019.104971
78
Salamon, J.; Dieckhoff, J.; Kaul, M. G.; Jung, C.; Adam, G.; Möddel, M.; Knopp, T.; Draack, S.; Ludwig, F.; Ittrich, H.
Visualization of spatial and temporal temperature distributions with magnetic particle imaging for liver tumor ablation therapy
2020 Article Scientific Reports
Journal Scientific Reports, 10 (7480): 1-11
DOI:
10.1038/s41598-020-64280-1
77
Boberg, M.; Knopp, T.; Szwargulski, P.; Möddel, M.
Generalized MPI Multi-Patch Reconstruction using Clusters of similar System Matrices
2020 Article IEEE Transactions on Medical Imaging
Journal IEEE Transactions on Medical Imaging, 39 (5): 1347-1358
DOI:
10.1109/TMI.2019.2949171
76
Graeser, M.; Ludewig, P.; Szwargulski, P.; Foerger, F.; Liebing, T.; Forkert, N. D.; Thieben, F.; Magnus, T.; Knopp, T.
Design of a head coil for high resolution mouse brain perfusion imaging using magnetic particle imaging
2020 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 65 (23): 235007
Publisher IOP Publishing
DOI:
10.1088/1361-6560/abc09e
75
Szwargulski, P.; Möddel, M.; Gdaniec, N.; Knopp, T.
Efficient Joint Image Reconstruction of Multi-Patch Data reusing a Single System Matrix in Magnetic Particle Imaging
2019 Article IEEE Transactions on Medical Imaging
Journal IEEE Transactions on Medical Imaging, 38 (4): 932-944
DOI:
10.1109/TMI.2018.2875829
74
Shasha, C.; Teeman, E.; Krishnan, K. M.; Szwargulski, P.; Knopp, T.; Möddel, M.
Discriminating nanoparticle core size using multi-contrast MPI
2019 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology
DOI:
10.1088/1361-6560/ab0fc9
73
Weller, D.; Salamon, J.; Frölich, A.; Möddel, M.; Knopp, T.; Werner, R.
Combining Direct 3D Volume Rendering and Magnetic Particle Imaging to Advance Radiation-Free Real-Time 3D Guidance of Vascular Interventions
2019 Article CardioVascular and Interventional Radiology
Journal CardioVascular and Interventional Radiology
DOI:
10.1007/s00270-019-02340-4
72
Latus, S.; Griese, F.; Schlüter, M.; Otte, C.; Möddel, M.; Graeser, M.; Saathoff, T.; Knopp, T.; Schlaefer, A.
Bimodal intravascular volumetric imaging combining OCT and MPI
2019 Article Medical Physics
Journal Medical Physics, 46 (3): 1371-1383
DOI:
10.1002/mp.13388
71
Kluth, T.; Szwargulski, P.; Knopp, T.
Towards accurate modeling of the multidimensional magnetic particle imaging physics
2019 Article New Journal of Physics
Journal New Journal of Physics, 21 (10): 103032
Publisher IOP Publishing
DOI:
10.1088/1367-2630/ab4938
70
Knopp, T.; Möddel, M.; Griese, F.; Werner, F.; Szwargulski, P.; Gdaniec, N.; Boberg, M.
MPIFiles.jl: A Julia Package for Magnetic Particle Imaging Files
2019 Article Journal of Open Source Software
Journal Journal of Open Source Software, 4 (38): 1331
DOI:
10.21105/joss.01331
69
Baltruschat, I. M.; Nickisch, H.; Grass, M.; Knopp, T.; Saalbach, A.
Comparison of Deep Learning Approaches for Multi-Label Chest X-Ray Classification
2019 Article Scientific reports
Journal Scientific reports, 9 (1): 6381
Publisher Nature Publishing Group
DOI:
10.1038/s41598-019-42294-8
68
Knopp, T.; Gdaniec, N.; Rehr, R.; Graeser, M.; Gerkmann, T.
Correction of linear system drifts in magnetic particle imaging
2019 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 64 (12): 125013 (11pp)
DOI:
10.1088/1361-6560/ab2480
67
Knopp, T.; Szwargulski, P.; Griese, F.; Grosser, M.; Boberg, M.; Möddel, M.
MPIReco.jl: Julia Package for Image Reconstruction in MPI
2019 Article International Journal on Magnetic Particle Imaging
Journal International Journal on Magnetic Particle Imaging, 5 (1): 9 pp
DOI:
10.18416/ijmpi.2019.1907001
66
Exner, M.; Szwargulski, P.; Ludewig, P.; Knopp, T.; Graeser, M.
3D Printed Anatomical Model of a Rat for Medical Imaging
2019 Article Current Directions in Biomedical Engineering
Journal Current Directions in Biomedical Engineering, 5 (1): 187-190
DOI:
10.1515/cdbme-2019-0048.
65
Graeser, M.; Thieben, F.; Szwargulski, P.; Werner, F.; Gdaniec, N.; Boberg, M.; Griese, F.; Möddel, M.; Ludewig, P.; Ven, D.; Weber, O. M.; Woywode, O.; Gleich, B.; Knopp, T.
Human-sized Magnetic Particle Imaging for Brain Applications
2019 Article Nature Communications
Journal Nature Communications, 10 (1936): 1-9
DOI:
10.1038/s41467-019-09704-x
64
Mogadas, N.; Sothmann, T.; Knopp, T.; Gauer, T.; Petersen, C.; Werner, R.
Influence of deformable image registration on 4D dose simulation for extracranial SBRT: A multi-registration framework study
2018 Article Radiotherapy and Oncology
Journal Radiotherapy and Oncology, 127 (2): 225-232
Publisher Elsevier
DOI:
10.1016/j.radonc.2018.03.015

TU Hamburg

Institute for Biomedical Imaging

Lottestraße 55, 2nd floor

22529 Hamburg