IBI: Niklas Hackelberg

Niklas Hackelberg, M.Sc.

Fraunhofer-Einrichtung für Individualisierte und Zellbasierte Medizintechnik IMTE
Mönkhofer Weg 239a
23562 Lübeck
- Postanschrift -

Technische Universität Hamburg (TUHH)
Institut für Biomedizinische Bildgebung
Gebäude E, Raum 4.044
Am Schwarzenberg-Campus 3
21073 Hamburg

E-Mail: niklas.hackelberg(at)imte.fraunhofer.de
E-Mail: niklas.hackelberg(at)tuhh.de
ORCID: https://orcid.org/0000-0002-0976-9049

Research Interests

Magnetic Particle Imaging
Image reconstruction in MPI, MRI and CT
Parallel computing in Julia

Curriculum Vitae

Niklas Hackelberg is a PhD student in the group of Tobias Knopp for Biomedical Imaging at the University Medical Center Hamburg-Eppendorf and the Hamburg University of Technology. In addition, he works as a software engineer at the Fraunhofer Research Institution for Individualized and Cell-Based Medical Engineering IMTE in Lübeck. He studied Computer Science at the Technical University of Hamburg from 2014 to 2021, where he earned his Master's degree with a thesis on "Development of a Scalable and Real-Time Capable Data Acquisition System for Magnetic Particle Imaging."

Journal Publications

52
Knopp, T.; Gdaniec, N.; Möddel, M.
Magnetic Particle Imaging: From Proof of Principle to Preclinical Applications
2017 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 62 (14): R124
DOI:
10.1088/1361-6560/aa6c99
51
Dieckhoff, J.; Kaul, M. G.; Mummert, T.; Jung, C.; Salamon, J.; Adam, G.; Knopp, T.; Ludwig, F.; Balceris, C.; Ittrich, H.
In vivo liver visualizations with magnetic particle imaging based on the calibration measurement approach
2017 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 62 : 3470-3482
DOI:
10.1088/1361-6560/aa562d
50
Knopp, T.; Conolly, S.; Buzug, T. M.
Recent progress in magnetic particle imaging: from hardware to preclinical applications
2017 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 62 (9): E4-E7
Publisher IOP Publishing
DOI:
10.1088/1361-6560/aa62c7
49
Sedlacik, J.; Frölich, A.; Spallek, J.; Forkert, N. D.; Werner, F.; Knopp, T.; Krause, D.; Fiehler, J.; Buhk, J.-H.
Detection of flow dynamic changes in 3D printed aneurysm models after treatment
2017 Article International Journal on Magnetic Particle Imaging
Journal International Journal on Magnetic Particle Imaging, 3 (1): 1 - 5
DOI:
10.18416/ijmpi.2017.1703005
48
Them, K.
On magnetic dipole-dipole interactions of nanoparticles in magnetic particle imaging
2017 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 62 (14): 5623
DOI:
10.1088/1361-6560/aa70ca
47
Schmiester, L.; Möddel, M.; Erb, W.; Knopp, T.
Direct Image Reconstruction of Lissajous Type Magnetic Particle Imaging Data using Chebyshev-based Matrix Compression
2017 Article IEEE Transactions on Computational Imaging
Journal IEEE Transactions on Computational Imaging
DOI:
10.1109/TCI.2017.2706058
46
Kaul, M. G.; Mummert, T.; Jung, C.; Salamon, J.; Khandhar, A. P.; Ferguson, R. M.; Kemp, S. J.; Ittrich, H.; Krishnan, K. M.; Adam, G.; Knopp, T.
In vitro and in vivo comparison of a tailored magnetic particle imaging blood pool tracer with resovist
2017 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 62 : 3454-3469
DOI:
10.1088/1361-6560/aa5780
45
Graeser, M.; Knopp, T.; Szwargulski, P.; Friedrich, T.; von Gladiss, A.; Kaul, M. G.; Krishnan, K. M.; Ittrich, H.; Adam, G.; Buzug, T. M.
Towards Picogram Detection of Superparamagnetic Iron-Oxide Particles Using a Gradiometric Receive Coil
2017 Article Scientific Reports
Journal Scientific Reports, 7 : 6872
DOI:
10.1038/s41598-017-06992-5
44
Storath, M.; Brandt, C.; Hofmann, M.; Knopp, T.; Salamon, J.; Weber, A.; Weinmann, A.
Edge preserving and noise reducing reconstruction for magnetic particle imaging
2016 Article IEEE Transactions on Medical Imaging
Journal IEEE Transactions on Medical Imaging, 36 (1): 74—85
Publisher IEEE
DOI:
10.1109/TMI.2016.2593954
43
Weber, A.; Werner, F.; Weizenecker, J.; Buzug, T. M.; Knopp, T.
Artifact free reconstruction with the system matrix approach by overscanning the field-free-point trajectory in magnetic particle imaging
2016 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 61 (2): 475-487
DOI:
10.1088/0031-9155/61/2/475
42
Kaethner, C.; Erb, W.; Ahlborg, M.; Szwargulski, P.; Knopp, T.; Buzug, T. M.
Non-Equispaced System Matrix Acquisition for Magnetic Particle Imaging based on Lissajous Node Points
2016 Article IEEE Transactions on Medical Imaging
Journal IEEE Transactions on Medical Imaging, 35 (11): 2476-2485
DOI:
10.1109/TMI.2016.2580458
41
Knopp, T.; Hofmann, M.
Online reconstruction of 3D magnetic particle imaging data
2016 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 61 (11): N257-N267
DOI:
10.1088/0031-9155/61/11/N257
40
Werner, F.; Jung, C.; Hofmann, M.; Werner, R.; Salamon, J.; Säring, D.; Kaul, M. G.; Them, K.; Weber, O. M.; Mummert, T.; Adam, G.; Ittrich, H.; Knopp, T.
Geometry planning and image registration in magnetic particle imaging using bimodal fiducial markers
2016 Article Medical Physics
Journal Medical Physics, 43 : 2884
DOI:
10.1118/1.4948998
39
Salamon, J.; Hofmann, M.; Jung, C.; Kaul, M. G.; Werner, F.; Them, K.; Reimer, R.; Nielsen, P.; Scheidt, A.; Adam, G.; Knopp, T.; Ittrich, H.
Magnetic Particle / Magnetic Resonance Imaging: In-Vitro MPI-Guided Real Time Catheter Tracking and 4D Angioplasty Using a Road Map and Blood Pool Tracer Approach
2016 Article PLoS ONE
Journal PLoS ONE, 11 (6)
DOI:
10.1371/journal.pone.0156899
38
Sedlacik, J.; Frölich, A.; Spallek, J.; Forkert, N. D.; Faizy, T. D.; Werner, F.; Knopp, T.; Krause, D.; Fiehler, J.; Buhk, J.-H.
Magnetic Particle Imaging for High Temporal Resolution Assessment of Aneurysm Hemodynamics
2016 Article PloS one
Journal PloS one, 11 (8): e0160097
DOI:
10.1371/journal.pone.0160097
37
Them, K.; Salamon, J.; Szwargulski, P.; Sequeira, S.; Kaul, M. G.; Lange, C.; Ittrich, H.; Knopp, T.
Increasing the sensitivity for stem cell monitoring in system-function based magnetic particle imaging
2016 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 61 (9): 13
DOI:
10.1088/0031-9155/61/9/3279
36
Them, K.; Kaul, M. G.; Jung, C.; Hofmann, M.; Mummert, T.; Werner, F.; Knopp, T.
Sensitivity enhancement in Magnetic Particle Imaging by Background Subtraction
2016 Article IEEE Transactions on Medical Imaging
Journal IEEE Transactions on Medical Imaging, 35 (3): 893-900
DOI:
10.1109/TMI.2015.2501462
ISBN:
0278-0062
35
Ahlborg, M.; Kaethner, C.; Knopp, T.; Szwargulski, P.; Buzug, T. M.
Using data redundancy gained by patch overlaps to reduce truncation artifacts in magnetic particle imaging
2016 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 61 (12): 4583-4598
DOI:
10.1088/0031-9155/61/12/4583
34
Weber, A.; Knopp, T.
Symmetries of the 2D magnetic particle imaging system matrix
2015 Article Physics in Medicine and Biology
Journal Physics in Medicine and Biology, 60 (10): 4033-44
DOI:
10.1088/0031-9155/60/10/4033
33
Weber, A.; Knopp, T.
Reconstruction of the Magnetic Particle Imaging System Matrix Using Symmetries and Compressed Sensing
2015 Article Advances in Mathematical Physics
Journal Advances in Mathematical Physics, Article ID 460496 : 9pp
DOI:
10.1155/2015/460496

Conference Proceedings

167
Nawwas, L.; Möddel, M.; Knopp, T.; Brandt, C.
Bias-reduction for sparsity promoting regularization in Magnetic Particle Imaging
2020 Contribution to Proceeding In "10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)"
Booktitle , 10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)Volume6, Page 1-2
DOI:
10.18416/IJMPI.2020.2009041
166
Steinmeister, L.; Baltruschat, I. M.; Ittrich, H.; Saalbach, A.; Nickisch, H.; Grass, M.; Knopp, T.; Adam, G.
Intelligent Chest X-Ray Worklist Prioritization by Deep Learning
2020 Contribution to Proceeding In "European Congress of Radiology (ECR 2020)"
Booktitle European Congress of Radiology (ECR 2020)
January 2020
DOI:
10.26044/ecr2020/C-07700
165
Boberg, M.; Knopp, T.; Möddel, M.
Reducing displacement artifacts by warping system matrices in efficient joint multi-patch magnetic particle imaging
2020 Contribution to Proceeding In "10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)"
Booktitle , 10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)Volume6, Page 1-3
DOI:
10.18416/IJMPI.2020.2009030
File:
https://journal.iwmpi.org/index.php/iwmpi/article/view/292
164
Graeser, M.; Szwargulski, P.; Foerger, F.; Thieben, F.; Ludewig, P.; Knopp, T.
Receive path calibration to exchange system matrix data of different receivers
2020 Contribution to Proceeding In "10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)"
Booktitle , 10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)Volume6, Page 1-3
DOI:
10.18416/IJMPI.2020.2009044
163
Graeser, M.; Liebing, T.; Szwargulski, P.; Foerger, F.; Thieben, F.; Ludewig, P.; Knopp, T.
Organ specific mouse head coil for improved image quality in magnetic particle imaging
2020 Contribution to Proceeding In "10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)"
Booktitle , 10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)Volume6, Page 1-3
DOI:
10.18416/IJMPI.2020.2009046
162
Grosser, M.; Knopp, T.
Accelerated Multi-Echo Gradient Echo Imaging using Locally-Low Rank Regularization
2020 Contribution to Proceeding In "Proceedings ISMRM 2020"
Booktitle Proceedings ISMRM 2020
161
Grosser, M.; Boberg, M.; Bahe, M.; Knopp, T.
Enhanced compressed sensing recovery of multi-patch system matrices in MPI
2020 Contribution to Proceeding In "10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)"
Booktitle , 10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)Volume6, Page 1-3
DOI:
10.18416/IJMPI.2020.2009035
160
Möddel, M.; Griese, F.; Kluth, T.; Knopp, T.
Estimating orientation using multi-contrast MPI
2020 Contribution to Proceeding In "10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)"
Booktitle , 10th International Workshop on Magnetic Particle Imaging (IWMPI 2020)Volume6
DOI:
10.18416/IJMPI.2020.2009023
159
Schauerte, M.; Szwargulski, P.; Kaul, M. G.; Knopp, T.; Graeser, M.
A Schematic Kidney Phantom for Magnetic Particle Imaging
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 59-60
158
Gdaniec, N.; Graeser, M.; Thieben, F.; Szwargulski, P.; Werner, F.; Boberg, M.; Griese, F.; Möddel, M.; Ludewig, P.; Ven, D.; Weber, O. M.; Woywode, O.; Gleich, B.; Knopp, T.
Determining Perfusion Parameters using Magnetic Particle Imaging: A Phantom Study using a Human-Sized Flow Phantom
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 151-152
157
Gdaniec, N.; Szwargulski, P.; Möddel, M.; Boberg, M.; Knopp, T.
Multi-Patch Magnetic Particle Imaging of a Phantom with Periodic Motion
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 27-28
156
Kosch, O.; Graeser, M.; Wells, J.; Radon, P.; Paysen, H.; Knopp, T.; Wiekhorst, F.
Towards resolution phantoms for multi-centric comparison of instrumentations
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 133-134
155
Szwargulski, P.; Exner, M.; Ludewig, P.; Knopp, T.; Graeser, M.
From a static to a dynamic 3D anatomical phantom of a rat
2019 Contribution to Proceeding In "Transactions on Additive Manufacturing Meets Medicine"
Booktitle , Transactions on Additive Manufacturing Meets MedicineVolume1
154
Szwargulski, P.; Graeser, M.; Thieben, F.; Gdaniec, N.; Werner, F.; Boberg, M.; Griese, F.; Möddel, M.; Knopp, T.
Interpretation of Cartesian Data based on a Simulated Human-Sized MPI Brain Imager
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 37-38
153
Szwargulski, P.; Ludewig, P.; Graeser, M.; Möddel, M.; Gdaniec, N.; Krishnan, K. M.; Ittrich, H.; Adam, G.; Magnus, T.; Knopp, T.
Dynamic Multi-Contrast Imaging of Two Different Tracer Materials in a Healthy Mouse
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 97-98
152
Werner, R.; Weller, D.; Salamon, J.; Möddel, M.; Knopp, T.
Toward employing the full potential of magnetic particle imaging: exploring visualization techniques and clinical use cases for real-time 3D vascular imaging
2019 Contribution to Proceeding In "Medical Imaging 2019: Biomedical Applications in Molecular, Structural, and Functional Imaging"
Booktitle In Barjor Gimi and Andrzej Krol, Editor, Medical Imaging 2019: Biomedical Applications in Molecular, Structural, and Functional ImagingVolume10953, Page 426 — 431
International Society for Optics and Photonics
Editor Barjor Gimi and Andrzej Krol
Publisher SPIE
DOI:
10.1117/12.2512442
151
Werner, R.; Weller, D.; Salamon, J.; Möddel, M.; Knopp, T.
Toward employing the full potential of magnetic particle imaging: exploring visualization techniques and clinical use cases for real-time 3D vascular imaging
2019 Contribution to Proceeding In "Medical Imaging 2019: Biomedical Applications in Molecular, Structural, and Functional Imaging"
Booktitle , Medical Imaging 2019: Biomedical Applications in Molecular, Structural, and Functional ImagingVolume10953, Page 109531V
SPIE
150
Griese, F.; Prieske, M.; Möddel, M.; Werner, R.; Knopp, T.
MRI-based field of view selection for precise, real-time targeting in MPI
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 207-208
149
Thieben, F.; Graeser, M.; Boberg, M.; Szwargulski, P.; Möddel, M.; Knopp, T.
Determining the Relation between Iron Mass and Spatial Resolution for a Human-Sized Magnetic Particle Brain Imager
2019 Contribution to Proceeding In "9th International Workshop on Magnetic Particle Imaging (IWMPI 2019)"
Booktitle 9th International Workshop on Magnetic Particle Imaging (IWMPI 2019), Page 41-42
148
Knopp, T.; Grosser, M.
MRIReco.jl: An Extensible Open-Source Image Reconstruction Framework written in Julia
2019 Contribution to Proceeding In "Proceedings ISMRM 2019"
Booktitle Proceedings ISMRM 2019

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Institute for Biomedical Imaging

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22529 Hamburg