An-Ping Zeng's list of publications

A. Peer Reviewed Papers and Book Chapters


You can find the publications of Prof. Zeng at google scholar or have a look underneath.



  1. Ren J, Wang W, Nie J, Yuan W, Zeng A-P,
    Understanding and engineering glycine cleavage system and related metabolic pathways for C1-based biossynthesis 
    In: A.-P. Zeng, N. Claassen (eds.) One-carbon feedstocks for sustainable Bioproduction, Adv. Biochem. Bioeng./Biotechnol., Springer  2021 (accepted)

  2. Hong Y, Zeng A-P,
    Bioprocesses based on one-carbon mixotrophy  
    In: A.-P. Zeng, N. Claassen (eds.) One-carbon feedstocks for sustainable Bioproduction, Adv. Biochem. Bioeng./Biotechnol., Springer  2021, in print

  3. Zhang C, Sharmal S, Wang W, Zeng A-P,
    A novel downstream process for highly pure 1,3-propanediol from
    efficient fed-batch fermentation of raw glycerol by
    Clostridium pasteurianum

    Engineering in Life Science 2021, in print

  4. Nie J, Zhang X, Schroer M, Liu Y, Wang W, Ren J, Svergun D, Zeng A-P,
    The enzyme lipoate-protein ligase A of E. coli forms a novel stimuli-
    responsive pure protein hydrogel with novel structure and enzymatic activity

    bioRxiv 2021

  5. Nie J, Zhang X, Wang W, Ren J, Zeng A-P,
    Tunable protein hydrogels: Present state and emerging development 
    In: A. Lavrentieva, I. Pepelanova, D. Seliktar (eds.) Tunable hydrogels and their application in biotechnology/medical biotechnology. Adv. Biochem. Bioeng/Biotechnol., Springer 2021, in print

  6. Chen M, Ma C, Chen L, Zeng A-P,
    Integrated laboratory evolution and rational engineering of GalP/Glk-
    dependent E. coli for higher yield and productivity of L-tryptophan

    Met. Eng. Comm. 2021, 12, e00167

  7. Meng H, Yuan Q, Ren J, Zeng A-P,
    An aldolase-based new pathway for condensation of formaldehyde
    and ethanol to synthesize 1,3-propanediol in E. coli

    ACS Synth. Biol. 2021

  8. Xu Y, Li Y, Zhang H, Nie J, Ren, J, Wang W, Zeng A-P,
    Stand-alone lipoylated H-protein of the glycine cleavage system enables
    glycine cleavage and the synthesis of glycine from one-carbon
    compounds in vitro

    bioRxiv 2021

  9. Selder L, Wang W, Groeger C, Sabra W, Zeng A-P,
    Bioconversion an downstream processing in the context of biorefinery: principles and process examples
    In: M. Aresta et al. (ed.) Biorefineries. De Gruyter Graduate 2021, in print

  10. Arbter P, Sabra W, Utesch T, Hong Y, Zeng A-P,
    Metabolomic and kinetic investigations on the electricity-aided
    production of butanol by Clostridium pasteurianum strains

    Engineering in Life Science 2021

  11. Wang S, Ma C, Zeng A-P,
    Dynamic energy correlation analysis E. coli aspartokinase III
    and alteration of allosteric regulation by manipulating energy
    transduction pathways

    Engineering in Life Science 2021, 21, 314-323

  12. Zeng A-P,
    Fermentation and bioprocess development
    Kirk-Othmer Encyclopedia of Chemical Technology. John Wiley & Sons, Inc. Mannheim 2021, in print

  13. Heuer J, Kraus Y, Vucak M, Zeng A-P,
    Enhanced sequestration of carbon dioxide into calcium carbonate using pressure and a carbonic anhydrase from alkaliphilic Coleofasciculus chthonoplastes
    Engineering in Life Science 2021, in print

  14. Hong Y, Arbter P, Wang W, Rojas L, Zeng A-P,
    Introduction of glycine synthase enables assimilation of C1
    carbon and strongly impacts the metabolism in Clostridium pasteurianum

    Biotechnology and Bioengineering 2020, 1-15

  15. Möller J, Bhat K, Riecken K, Pörtner R, Jandt U, Zeng A-P,
    Lactate metabolism in CHO cells: Investigation of pyruvate
    dehydrogenase complex regulation

    Engineering in Life Science 2020, 21: 100-114

  16. Zhang H, Li Y, Nie J, Ren J, Zeng A-P,
    Structure-based dynamic analyses of the glycine cleavage
    system suggests key residues for control of a key reaction step

    Communication Biology 2020, 3 (1), 1-12

  17. Depta P N, Jandt U, Jacobi C, Dosta M, Zeng A-P, Heinrich S,
    Data-driven multiscale modeling of self-assembly and
    hierarchical structural formation in biological macromolecular sytems

    Chemie Ingenieur Technik 2020, 92, 1249-1249

  18. Arbter P, Beisch H, Utesch T, Fiedler B, Zeng A-P,
    Control of biosynthesis in bioelectrochemical systems
    Chemie Ingenieur Technik 2020, 92, 1212-1212

  19. Zhang X, Nie J, Zheng Y, Ren J, Zeng A-P,
    Activation and competition of H protein lipoylation in a
    reaction cascade catalyzed by the multifunctional enzyme lipoate-protein ligase A

    Biotechnology and Bioengineering 2020, 1-11

  20. Zeng AP, Bley T, Takors R, Flemming D,
    Open Access for the future
    Engineering Life Science 2020, 20, 4

  21. Xu Y, Meng H, Ren J, Zeng A-P,
    Formaldehyde formation in the glycine cleavage system and
    its use for an aldolase-based biosynthesis of 1,3-propanediol

    Journal of Biological Engineering 2020, 14:15, 1-10

  22. Möller J, Rosenberg M, Riecken K, Pörtner R, Zeng A-P, Jandt U,
    Quantification of the dynamics of population heterogeneities in
    CHO cultures with stably integrated fluorescent markers

    Analytical and Bioanalytical Chemistry 2020, 1-16

  23. Selder L, Sabra W, Jürgensen N, Lakshmanan A, Zeng A-P,
    Co-cultures with integrated in-situ product removal for lactate-based
    PA production

    Bioprocess Biosyst Eng. 2020, 1-9

  24. Hong Y, Ren J, Zhang X, Wang W, Zeng A-P,
    Quantitative analysis of glycine related metabolic pathways for one-carbon synthetic biology
    Current Opinion in Biotechnology 2020, 64, 70-78

  25. Möller J, Korte K, Pörtner R, Zeng A-P, Jandt U,
    Near-Physiological Cell Cycle Synchronization with Countercurrent Centrifugal Elutriation
    Animal Cell Biotechnology 2020, 3-16

  26. Möller J, Bhat K, Riecken K, Pörtner R, Zeng A-P, Jandt U,
    Process-induced cell cycle oscillations in CHO cultures: online monitoring and model-based investigation
    Biotechnol. Bioeng. 2020, (in print)

  27. Jacobi C, Ilhan S, Steinbrecher T, Khansahib I, Depta N, Dosta M, Heinrich S, Zeng A-P, Jandt U,
    Towards Designed Multienzymatic Bioreactions: Changed Assembly

  28. Zeng A-P, Takors R, Bley T,
    Editorial: Engineering mindset for Life Sciences and Biotechnology
    Eng. In Life Sciences 2019, 19, 158-158

  29. Arbter P, Sinha A, Toresch J, Utesch T, Zeng A-P,
    Redox governed electro-fermentation improves lipid production by the oleaginous yeast Rhodosporidium toruloides under aerobic and microaerobic conditions
    Bioresource Technol. 2019, 294, 122122

  30. Zhou L, Ren J, Li Z, Nie J, Wang C, Zeng A-P,
    Characterization and engineering of a Clostridium glycine riboswitch and its use to control a novel metabolic pathway for 5-aminolevulinic acid production in Escherichia coli
    ACS Synth. Biol. 2019, 8 (10), 2327-2335

  31. Wang C, Ren J, Zhou L, Li Z, Zeng A-P,
    An aldolase-catalyzed new metabolic pathway for the assimilation of formaldehyde and methanol to synthesize 2-keto-4-hydroxybutyrate and 1,3-propanediol in Escherichia coli
    ACS Synth. Biol. 2019, 8 (11), 2483-2493

  32. Zhang X, Li M, Xu Y, Ren J, Zeng A-P,
    Quantitative study of H protein lipoylation of the glycine cleavage system and a strategy to increase its activity by co-expression of LplA
    J. Biol. Eng. 2019, 32

  33. Zeng A-P,
    New bioproduction systems for chemicals: Needs and new development
    Biotechnol. Adv. 2019, 37, 508-518

  34. ZhangY, Ma C, Dischert W, Soucaille P, Zeng A-P,
    Engineering of phosphoserine aminotransferase for L-homoserine conversion to 4-hydroxy-2-ketobutyrate in a glycerol-independent pathway of 1,3-propanediol production from glucose
    Biotechnol. J. 2019

  35. Chen M, Chen L, Zeng A-P,
    CRISPR/Cas9-facilitated engineering and growth-coupled in vivo screening of enzyme variants for efficient biosynthesis of L-tryptophan in E. coli
    Met. Eng. Commun. 2019, 9

  36. Depta PN, Jandt U, Dosta M, Zeng A-P, Heinrich S,
    Towards multi-scale modeling of proteins and bio-agglomerates: An orientation-sensitive diffusion model for the integration of Molecular Dynamics and the Discrete Element Method
    Journal of Chemical Information and Modeling 2019, 59, 386-398

  37. Utesch T, Groeger C, Sabra W, Baur J, Zeng A-P,
    Enhanced electron transfer of different mediators for strictly opposite shifting of metabolism in Clostridium pasteurianum grown on glycerol in a new electrochemical bioreactor
    Biotechnol. Bioeng. 2019, 1

  38. Wurm M, Ilhan S, Jandt U, Zeng A-P,
    Direct and Highly Sensitive Measurement of Fluorescent Molecules in Bulk Solutions using Flow Cytometry
    Anal. Biochemistry 2019, 570, 32-42

  39. Enzmann F, Stöckl M, Zeng A-P, Holtmann D,
    Same but different - Scaling Up and Numbering Up in Electrobiotechnology and Photobiotechnology
    Eng. Life Sci. 2019, 19, 121-132

  40. Ren J, Zhou L, Wang C, Lin C, Li Z, Zeng A-P,
    An unnatural pathway for efficient 5-aminolevulinic acid biosynthesis with glycine from glyoxylate based on retrobiosynthetic design
    ACS Synth. Biol. 2018, 7, 2750-2757

  41. Möller J, Korte K, Pörtner R, Zeng A-P, Jandt U,
    Cell-cycle and putative autocrine dependent metabolism in CHO production cell line under near-physiological conditions
    Biotechnol. Bioeng. 2018, 115 (12), 2996-3008

  42. Chen L, Chen M, Ma C, Zeng A-P,
    Discovery of feed-forward regulation in L-tryptophan biosynthesis and its use in metabolic engineering of E. Coli for efficient tryptophan bioproduction
    Met. Eng. 2018, 47, 434-444

  43. Zhao H and Zeng A-P,
    Preface: Exploring the Synergy between Synthetic Biology and Metabolic Engineering
    Adv. Biochem. Bioeng/Biotechnol 2018, 162, V-VI

  44. Utesch T and Zeng A-P,
    A Novel "All-In-One" Electrode and Bioreactor Enable Better Study of Electrochemical Effects and Electricity-Aided Bioprocesses
    Eng. Life Sci. 2018, 18, 600-610

  45. Brost R, Sabra W, Hong Y, Utesch T, Zeng A-P,
    Improved electrocompetence and metabolic engineering of Clostridium pasteurianum revealed a new regulation pattern of glycerol mono- and cosubstrate fermentation
    Eng. Life Sci. 2018

  46. Wang Z, Liu J, Chen L, Zeng A-P, Solem C, Jensen PR,
    Alterations in the transcription factors GntR1 and RamA enhance the growth and central metabolism of Corynebacterium glutamicum
    Met. Eng. 2018, 48, 1-12

  47. Hezayeh S, Zeng A-P, Jandt U,
    Full Enzyme Complex Simulation: Interactions in Human Pyruvate Dehydrogenase Complex
    J. Chem. Inf. Model. 2018, 58(2), 362-369

  48. Song L., Zeng A-P,
    Orthogonal information encoding in living cells with high error-tolerance, safety and fidelity
    ACS. Synth. Biol. 2018, 7 (3), 866–874

  49. Mora-Villalobos J-A and Zeng, A-P,
    Synthetic pathways and pocesses for effective production of 5-hydroxytryptophan and serotonin from glucose in Escherichia coli
    J. Biol. Eng. 2018, 12 (1)

  50. Meyne N, Fuge G, Zeng A-P, Jacob AF,
    Resonant Microwave Sensors for Picoliter Liquid Characterization and Non-Destructive Detection of Single Biological Cells
    IEEE Journal of Electromagnetics, RF and Microwaves in Medicine and Biology 2017

  51. Jandt U, Hezayeh S, Ilhan S, Zeng A-P,
    Full strucural modeling of multi enzymatic nanomachines: flexible domain interacions within pyruvate dehydrogenase complex
    FEBS JOURNAL 2017, 284, 79-80

  52. Sabra W, Bommareddy RR, Maheshwari G, Papanikolaou S, Zeng A-P,
    Substrates and oxygen dependant citric acid production by Yarrowia lipolytica: Insights through transcriptome and fluxome analysis
    Microbial Cell Factory, 16

  53. Fuge G, Hong Y, Riecken K, Zeng A-P, Jandt U,
    CHO cells engineered for fluorescence read out of cell cycle and growth rate in real time
    Biotechnology Progress 2017, 33, 1408-1417

  54. Qin L, Liu L, Zeng A-P, Wie D,
    From low-cost substrates to microbial lipid by oleaginous yeast and microalgae as cell factory
    Bioresources Technology 2017, 245, 1507-1519

  55. Song L., Zeng A-P,
    Engineering cells as robots for parallel and highly sensitive screening of biomolecules under in vivo conditions
    Sci. Report 2017, 7 (1), 15145

  56. Mora-Villalobos J-A and Zeng, A-P,
    Protein and pathway engineering for the biosynthesis of 5-hydroxytryptophan in Escherichia coli
    Eng. Life Sci. 2017, 17, 892-899

  57. Groeger C,Wang W,Sabra W, Utesch T, Zeng A-P ,
    Metabolic and proteomic analysis of producr selectivity and redox regulation in Clostridium pasteurianum grown on glycerol under varied iron availability
    Microb. Cell Fact. 2017, 16 (1)

  58. Hezayeh S, Zeng A-P, Jandt U,
    Investigation of Core Structure and Stability of Human Pyruvate Dehydrogenase Complex: a Coarse-Grained Approach
    ACS Omega 2016, 2 (3), 1134-1145

  59. Guo J, Hezaveh S, Tatur J, Zeng A-P, Jandt U ,
    Reengineering of human pyruvate dehydrogenase complex: from disintegration to highly active agglomerates
    Biochemical Journal 2017, 474 (5), 865-875

  60. Zhao H, Zeng A-P (eds.),
    Synthetic Biology - Metabolic Engineering
    Adv. Biochem. Eng. /Biotechnol. 2017, 162

  61. Geng F., Ma C., Zeng A-P,
    Reengineering substrate specificity of E. coli glutamate dehydrogenase using a position-based prediction method
    Biotechnol. Letter 2017, 39 (4), 599-605

  62. Fuge G, Zeng A-P, Jandt U,
    Weak cell cycle dependency but strong distortive effects of transfection with Lipofectamine 2000 in near-physiologically synchronized cell culture
    Eng. Life Sci 2017, 17 (4), 348-356

  63. Ma C-W, Zhou L, Zeng A-P,
    Engineering Biomolecular Switches for Dynamic Metabolic Control
    A.-P. Zeng, H. Zhao (eds.) Synthetic Biology and Metabolic Engineering. Adv. Biochem. Eng. /Biotechnol. 2017, 162, 45-67

  64. Papanikolaou S,Rontou M, Belka A, Athenaki M, Gardeli C, Mallouchos A, Kalantzi O, Koutinas A, Zeng A-P, Aggelis G,
    Conversion of biodiesel-derived glycerol into biotechnological products of industrial significance by a relatively broad spectrum of yeasts and fungi.
    Eng. Life Sci 2017, 17 (3), 262-281

  65. da Luz J A, Hans E, Frank D, Zeng, A-P,
    Analysis of intracellular metabolites of Corynebacterium glutamicum at high cell density with automated sampling and filtration and assessment of engineered enzymes for effective L-lysine production
    Eng. Life Sci 2017, 17, 512-522

  66. Bommareddy RR, Sabra W, Zeng A-P,
    Glucose‐mediated regulation of glycerol uptake in Rhodosporidium toruloides: Insights through transcriptomic analysis on dual substrate fermentation
    Eng. Life Sci 2017, 17 (3), 282-291

  67. Chen L, Zeng A-P,
    Rational Design and Metabolic Analysis of Escherichia coli for Effective Production of L-Tryptophan at High Concentration,
    Appl. Microbiol. Biotechnol. 2017, 15, 559-568

  68. Chen Z, Geng F, Zeng A-P,
    Erratum: Protein design and engineering of a de novo pathway for microbial production of 1,3-propanediol from glucose
    Biotechnology Journal 2016, 11, 1368-1368

  69. Pörtner R, Jandt U, Zeng A-P,
    Cell Culture Technology
    JC Liao and C. Wittmann (eds.) Industrial Biotechnology: Products and Processes, Wiley-VCH 2016, 129-158

  70. Hwang ET, Seo B-K, Gu MB, Zeng A-P,
    Successful bi-enzyme stabilization for the biomimetic cascade transformation of carbon dioxide,
    Catalysis Science Technology 2016, 6(19), 7267-7272

  71. Hezaveh S, Zeng A-P, Jandt U ,
    Human Pyruvate Dehydrogenase Complex E2 and E3BP Core Subunits: New Models and Insights from Molecular Dynamics Simulations
    Journal of Physical Chemistry B 2016, 120, 4399–4409

  72. Groeger C, Sabra W, Zeng A-P,
    Simultaneous production of 1, 3‐propanediol and n‐butanol by Clostridium pasteurianum: In situ gas stripping and cellular metabolism
    Eng. Life Sci 2016, 16 (7), 664-674

  73. Chen Z, Zeng A-P,
    Protein engineering approaches to chemical biotechnology
    Curr. Opin. Biotechnol. 2016, 42, 198–205

  74. Sabra W, Wang W, Surandram S, Groeger C, Zeng A-P,
    Fermentation of mixed substrates by Clostridium pasteurianum and its physiological, metabolic and proteomic characterizations
    Microb Cell Fact 2016, 5 (1), 114-

  75. Sabra W, Groeger C, Zeng A-P,
    Microbial cell factories for diol production
    Q. Ye and JJ. Zhong et al. (eds.) “Bioreactor Engineering Research and Industrial Applications I: Cell Factories”, Series of “Advances in Biochemical Engineering/Biotechnology” 2016, 155, 165-197

  76. Zeng A-P, Kaltschmitt M,
    Green electricity and bio-wastes via biogas to bulk-chemicals and fuels
    Eng. Life Sci. 2016, 16, 211-221

  77. Sabra W, Roeske I, Sahm K, Antranikian G, Zeng A-P,
    Metabolic and microbial characterization of high-temperature biogas reactors treating stillage from an industrial bioethanol process
    Eng Life Sci 2015, 15, 743–750

  78. Zhou L, Bomareddy R R, Zeng A-P,
    Engineering lysine-ON riboswitch for metabolic self-control of lysine production in Corynebacterium glutamicum
    ACS Synthetic Biology 2015, 4 (12), 1335−1340

  79. Castillo A E, Fuge G, Jandt U, Zeng A-P,
    Growth kinetics and validation of near-physiologically synchronized HEK293s cultures
    Eng Life Sci 2015, 15, 509-518

  80. Bomareddy R R, Sabra W, Maheshwari G, Zeng A-P,
    Metabolic network analysis and experimental study of lipid production in Rhodosporidium toruloides grown on single and mixed substrates
    Microbil Cell Factory 2015, 14, 36

  81. Ma CW, Xiu ZL, Zeng A-P,
    Exploring signal transduction in heteromultimeric protein based on energy dissipation model
    J. Biomol. Struct. & Dyn. 2015, 33, 134-146

  82. Groeger C, Sabra W, Zeng A-P,
    Introduction to Bioconversion and Downstream Processing: Principles and Process Examples
    M. Aresta et al. (ed.) Biorefineries. De Gruyter Graduate 2015, 81-104

  83. Zhou L, Zeng A-P,
    Exploring Lysine Riboswitch for Metabolic Flux Control and Improvement of l-Lysine Synthesis in Corynebacterium glutamicum
    ACS Synth Biol 2015, 4, 729-734

  84. Kaeding T, DaLuz J, Kube J, Zeng A-P,
    Integrated study of fermentation and downstream processing in a miniplant significantly improved the microbial 1,3-propanediol production from raw glycerol
    Bioprocess Biosystems Eng 2015, 38, 575-586

  85. Jandt U, Platas Barradas O, Pörtner R, Zeng A-P,
    Synchronized mammalian cell culture: Part II Population ensemble modeling and analysis for development of reproducible processes
    Biotechnol Progress 2015, 31, 175-185

  86. Platas Barradas O, Jandt U, Bahnemann J, Becker M, Pörtner R, Zeng A-P,
    Synchronized mammalian cell culture: Part I A synchronization strategy with further cultivation under physiological conditions
    Biotechnol Progress 2015, 31, 165-174

  87. Chen Z, Rappert S, Zeng A-P,
    Rational Design of Allosteric Regulation of Homoserine Dehydrogenase by a Non-Natural Inhibitor L-Lysine
    ACS Synth Biol 2015, 4, 126-131

  88. Chen Z, Geng F, Zeng A-P,
    Protein design and engineering of a de novo pathway for microbial production of 1,3-propanediol from glucose
    Biotechnology Journal 2015, 10, 284-289

  89. Oehmke S, Zeng A-P,
    Recovery of biologically produced 3-hydroxypropionaldehyde and its dehydrated product acrolein
    Eng Life Sci 2015, 15, 133-139

  90. Meyne N, Fuge G, Hemanth S, Trieu HK, Zeng A-P, Jacob AF,
    Broadband dielectric characterization of CHO-K1 cells using miniaturized transmission-line sensor
    IEEE Proceedings BioWireleSS 2015, (accepted)

  91. Bley T, Zeng A-P,
    Editorial: Biomaterials Made in Bioreactors
    Eng Life Sci 2015, 15 (7), 669

  92. Conrads G, de Soet J J, Song L, Henne K, Sztajer H, Wagner-Döbler I, Zeng A-P,
    Comparing the cariogenic species Streptococcus sobrinus and S. mutans on whole genome level
    Journal of Oral Microbiology 2014, 6, 6189

  93. Roeske I, Sabra W, Nacke H, Daniel R, Zeng A-P, Antranikian G, Sahm K,
    Microbial community composition and dynamics in high-temperature biogas reactors using industrial bioethanol waste as substrate
    Appl Microbiol Biotechnol 2014, 98, 9095-9106

  94. Rieckenberg F, Ardao I, Rujananon R, Zeng A-P,
    Cell-free synthesis of 1,3-propanediol from glycerol with a high yield
    Eng Life Sci 2014, 14, 380-386

  95. Rieckenberg F, Götz K, Hilterhaus L, Liese A, Zeng A-P,
    Strategies for reliable and improved large-scale production of Pyrococcus furiosus with integrated purification of hydrogenase I
    Bioprocess Biosyst Eng 2014, 37, 2475-2482

  96. He FQ, Sauermann U, Beer C, Winkelmann S, Yu Z, Sopper S, Zeng A-P, Wirth M,
    Identification of molecular sub-1 networks associated with cell survival in a chronically SIVmac infected human CD4+ T-cells
    Virology Journal 2014, 11, 152

  97. Bommareddy RR, Chen Z, Rappert S, Zeng A-P,
    A de novo NADPH generation pathway for improving lysine production of Corynebacterium glutamicum by rational design of the coenzyme specificity of glyceraldehyde 3-phosphate dehydrogenase
    Metab Eng 2014, 25, 30-37

  98. Sudhakar P, Reck M, Wang W, He F, Dobler I, Zeng A-P,
    Construction and verification of the transcriptional regulatory response network of Streptococcus mutans upon treatment with the biofilm inhibitor carolacton
    BMC Genomics 2014, 15, 362

  99. Gröger C, Sabra W, Zeng A-P,
    Co-Produktion von Propandiol und Butanol in Fermentation mit In-Situ-Produkttrennung
    Chemie Ingenieur Technik 2014, 10, (in print)

  100. Kubick S, Zeng A-P,
    Editorial: New and synthetic bioproduction systems
    Eng Life Sci 2014, 14, 338-339

  101. Sabra W, Groeger C, Sharma PN, Zeng A-P,
    Improved n-butanol production by a non-acetone producing Clostridium pasteurianum DSMZ 525 in mixed substrate fermentation
    Appl Microbiol Biotechnol 2014, 98, 4267-4276

  102. Nicolae A, Wahrheit J, Bahnemann J, Zeng A-P, Heinzle E,
    Non-stationary 13C metabolic flux analysis of Chinese hamster ovary cells in batch culture using extracellular labeling highlights metabolic reversibility and compartmentation
    BMC Syst Biol 2014, 8, 50

  103. Rajabi N, Bahnemann J, Tzeng T-N, Platas Barradas O, Zeng A-P, Müller J,
    Lab-on-a-chip for cell perturbation, lysis, and efficient separation of sub-cellular components in a continuous flow mode
    Sensors and Actuators A: Physical 2014, 215, 136-143

  104. Sabra W, Zeng A-P,
    Mixed Microbial Cultures for Industrial Biotechnology: Success, Chance and Challenges
    Industrial Biocatalysis (Ed. P. Grunwald) 2014

  105. Ma C-W, Lüddecke J, Forchhammer K, Zeng A-P,
    Population shift of binding pocket size and dynamic correlation analysis shed new light on the anticooperative mechanism of PII protein
    Proteins: Structure, Function, and Bioinformatics 2014, 82, 1048-1059

  106. Jandt U, Platas Barradas O, Pörtner R, Zeng A-P,
    Mammalian cell culture synchronization under physiological conditions and population dynamic simulation
    Appl Microbiol Biotechnol 2014, 98, 4311-4319

  107. Bahnemann J, Kayo S, Wahrheit J, Heinzle E, Pörtner R, Zeng A-P,
    In search of an effective cell disruption method to isolate intact mitochondria from Chinese hamster ovary cells
    Eng Life Sci 2014, 14, 161-169

  108. Chen Z, Bommareddy RR, Frank D, Rappert S, Zeng A-P,
    Deregulation of feedback inhibition of phosphoenolpyruvate carboxylase for improved lysine production in Corynebacterium glutamicum
    Appl Environ Microbiol 2014, 80, 1388-1393

  109. Sabra W, Haddad AM, Zeng A-P,
    Comparative physiological study of the wild type and the small colony variant of Pseudomonas aeruginosa 20265 under controlled growth conditions
    World J Microbiol Biotechnol 2014, 30, 1027-1036

  110. da Luz JA, Hans E, Zeng A-P,
    Automated fast filtration and on-filter quenching improve the intracellular metabolite analysis of microorganisms
    Eng Life Sci 2014, 14, 135-142

  111. Cumana S, Ardao I, Zeng A-P, Smirnova I,
    Glucose-6-phosphate dehydrogenase encapsulated in silica-based hydrogels for operation in a microreactor
    Eng Life Sci 2014, 14, 170-179

  112. He FQ, Wang W, Zheng P, Sudhakar P, Sun J, Zeng A-P,
    Essential O2-responsive genes of Pseudomonas aeruginosa and their network revealed by integrating dynamic data from inverted conditions
    Integr Biol (Camb) 2014, 6, 215-223

  113. Dietz D, Zeng A-P,
    Efficient production of 1,3-propanediol from fermentation of crude glycerol with mixed cultures in a simple medium
    Bioprocess Biosyst Eng 2014, 37, 225-233

  114. Gu MB, Zeng A-P,
    Industrial biotechnology in Asia recent advances in biofuels and biorefinery
    Eng Life Sci 2013, 13, 419-420

  115. Zeng A-P,
    Fundamentals and Application of New Bioproduction Systems
    Advances in Biochemical Engineering/Biotechnology 2013, 137, 238

  116. Li J, Wang W, Wang Y, Zeng A-P,
    Two-dimensional gel-based proteomic of the caries causative bacterium Streptococcus mutans UA159 and insight into the inhibitory effect of carolacton
    Proteomics 2013, 13, 3470-3477

  117. Bahnemann J, Rajabi N, Fuge G, Barradas O, Müller J, Pörtner R, Zeng A-P,
    A New Integrated Lab-on-a-Chip System for Fast Dynamic Study of Mammalian Cells under Physiological Conditions in Bioreactor
    Cells 2013, 2, 349-360

  118. Kayo S, Bahnemann J, Klauser M, Pörtner R, Zeng A-P,
    A microfluidic device for immuno-affinity-based separation of mitochondria from cell culture
    Lab Chip 2013, 13, 4467-4475

  119. Platas O, Jandt U, Sandig V, Pörtner R, Zeng A-P,
    An integrated synchronization approach for studying cell-cycle dependent processes of mammalian cells under physiological conditions
    BMC Proc 2013, 7, 01.03.2014

  120. Platas O, Sandig V, Pörtner R, Zeng A-P,
    Evaluation of process parameters in shake flasks for mammalian cell culture
    BMC Proc 2013, 7, 01.03.2014

  121. Geng J, Bi JX, Zeng A-P, Yuan JQ,
    Application of hybrid cybernetic model in simulating myeloma cell culture co-consuming glucose and glutamine with mixed consumption patterns
    Process Biochemistry 2013, 48, 955-964

  122. Jandt U, You C, Zhang YH, Zeng A-P,
    Compartmentalization and metabolic channeling for multienzymatic biosynthesis: practical strategies and modeling approaches
    Adv Biochem Eng Biotechnol 2013, 137, 41-65

  123. Ardao I, Hwang ET, Zeng A-P,
    In vitro multienzymatic reaction systems for biosynthesis
    Adv Biochem Eng Biotechnol 2013, 137, 153-184

  124. Rappert S, Song L, Sabra W, Wang W, Zeng A-P,
    Draft Genome Sequence of Type Strain Clostridium pasteurianum DSM 525 (ATCC 6013), a Promising Producer of Chemicals and Fuels
    Genome Announc 2013, 1

  125. Rajabi N, Bahnemann J, Tzeng T-N, Zeng A-P, Müller J,
    Microfluidic Device for the continuous preparation of Eukaryotic cells for metabolic analysis
    Proceedings of MEMS, Taiwan 2013

  126. Rajabi N, Bahnemann J, Wahrheit J, Heinzle E, Zeng A-P, Müller J,
    INERTIAI-based Media Exchange and Quenching For Continuous Cell Preparation in a Lab-on-a-Chip
    Proceedings of the 3rd European Conference on Microfluidics - Microfluidics 2012 - Heidelberg 2013

  127. Ma H-W, Zeng A-P,
    Reconstruction of Metabolic Network from Genome Information and its Strutural and Functional Analysis
    Computational Systems Biology, Second Edition, Elsevier 2013

  128. Chen Z, Jandt U, Rappert S, Zeng A-P,
    Protein-Design für die Entwicklung von industriellen Mikroorganismen
    Biospektrum 2013, 19, 99-101

  129. Song L, Wang W, Conrads G, Rheinberg A, Sztajer H, Reck M, Wagner-Dobler I, Zeng A-P,
    Genetic variability of mutans streptococci revealed by wide whole-genome sequencing
    BMC Genomics 2013, 14, 430

  130. Chen Z, Zeng A-P,
    Protein design in systems metabolic engineering for industrial strain development
    Biotechnol J 2013, 8, 523-533

  131. Dietz D, Sabra W, Zeng A-P,
    Co-cultivation of Lactobacillus zeae and Veillonella criceti for the production of propionic acid
    AMB Express 2013, 3, 01.09.2014

  132. Sabra W, Dietz D, Zeng A-P,
    Substrate-limited co-culture for efficient production of propionic acid from flour hydrolysate
    Appl Microbiol Biotechnol 2013, 97, 5771-5777

  133. Rheinberg A, Song L, Wang W, Reck M, Wagner-Dobler I, Zeng A-P, Conrads G,
    Key differences in the metabolom between Streptococcus mutans and S. sobrinus as determined by whole-genome comparison of multiple strains
    Int. J. od Medical Microbiology 2013, 303, 49-49

  134. Freund S, Rath A, Platas Barradas O, Skerhutt E, Scholz S, Niklas J, Sandig V, Rose T, Heinzle E, Noll T, et al,
    Batch-to-batch variability of two human designer cell lines – AGE1.HN and AGE1.HN.AAT – carried out by different laboratories under defined culture conditions using a mathematical model
    Eng Life Sci 2013, 13, 580-592

  135. Metsoviti M, Zeng A-P, Koutinas AA, Papanikolaou S,
    Enhanced 1,3-propanediol production by a newly isolated Citrobacter freundii strain cultivated on biodiesel-derived waste glycerol through sterile and non-sterile bioprocesses
    J Biotechnol 2013, 163, 408-418

  136. Chen L, Chen Z, Zheng P, Sun J, Zeng A-P,
    Study and reengineering of the binding sites and allosteric regulation of biosynthetic threonine deaminase by isoleucine and valine in Escherichia coli
    Appl Microbiol Biotechnol 2013, 97, 2939-2949

  137. Geng F, Chen Z, Zheng P, Sun J, Zeng A-P,
    Exploring the allosteric mechanism of dihydrodipicolinate synthase by reverse engineering of the allosteric inhibitor binding sites and its application for lysine production
    Appl Microbiol Biotechnol 2013, 97, 1963-1971

  138. Li J, Wang W, Ma Y, Zeng A-P,
    Medium optimization and proteome analysis of (R,R)-2,3-butanediol production by Paenibacillus polymyxa ATCC 12321
    Appl Microbiol Biotechnol 2013, 97, 585-597

  139. Ardao I, Zeng A-P,
    In silico evaluation of a complex multi-enzymatic system using one-pot and modular approaches: Application to the high-yield production of hydrogen from a synthetic metabolic pathway
    Chemical Engineering Science 2013, 87, 183-193

  140. He F, Chen H, Probst-Kepper M, Geffers R, Eifes S, Del Sol A, Schughart K, Zeng A-P, Balling R,
    PLAU inferred from a correlation network is critical for suppressor function of regulatory T cells
    Mol Syst Biol 2012, 8, 624

  141. Schomburg KT, Ardao I, Gotz K, Rieckenberg F, Liese A, Zeng A-P, Rarey M,
    Computational biotechnology: prediction of competitive substrate inhibition of enzymes by buffer compounds with protein-ligand docking
    J Biotechnol 2012, 161, 391-401

  142. Metsoviti M, Paraskevaidi K, Koutinas A, Zeng A-P, Papanikolaou S,
    Production of 1,3-propanediol, 2,3-butanediol and ethanol by a newly isolated Klebsiella oxytoca strain growing on biodiesel-derived glycerol based media
    Process Biochemistry 2012, 47, 1872-1882

  143. Rajabi N, Hoffmann M, Bahnemann J, Zeng A-P, Schl, uuml, ter M, ller J, ouml, rg,
    A Chaotic Advection Enhanced Microfluidic Split-and-Recombine Mixer for the Preparation of Chemical and Biological Probes

  144. Schöpke B, Zeng A-P,
    Inference of responsive metabolic pathways from time-series transcriptomic data with consideration of the metabolic network structure
    Integr Biol (Camb) 2012, 4, 889-896

  145. Wurm M, Zeng A-P,
    Estimation of protein and metabolite release rates from damaged mammalian cells by using GFP as a marker molecule
    Metabolomics 2012, 8, 1081-1089

  146. Wurm M, Zeng A-P,
    Mechanical disruption of mammalian cells in a microfluidic system and its numerical analysis based on computational fluid dynamics
    Lab Chip 2012, 12, 1071-1077

  147. Ma C-W, Xiu Z-L, Zeng A-P,
    Discovery of Intramolecular Signal Transduction Network Based on a New Protein Dynamics Model of Energy Dissipation
    PLoS One 2012, 7, e31529

  148. Jandt U, Zeng A-P,
    Modeling of intracellular transport and compartmentation
    Advances in Biochemical Engineering Biotechnology 2012, 127, 221-249

  149. Platas Barradas O, Poertner R, Jandt U, Phan LDM, Villanueva ME, Rath A, Reichl U, Schraeder E, Scholz S, Noll T, Sandig V, Zeng A-P,
    Evaluation of criteria for bioreactor comparison and operation standardisation for mammalian cell culture
    Eng. Life Sciences 2012, 12, 01.11.2018

  150. Song L, Sudhakar P, Wang W, Conrads G, Brock A, Sun J, Wagner-Dobler I, Zeng A-P,
    A genome-wide study of two-component signal transduction systems in eight newly sequenced mutans streptococci strains
    BMC Genomics 2012, 13, 128

  151. Metsoviti M, Paramithiotis S, Drosinos EH, Galiotou-Panayotou M, Nychas G-JE, Zeng A-P, Papanikolaou S,
    Screening of bacterial strains capable of converting biodiesel-derived raw glycerol into 1,3-propanediol, 2,3-butanediol and ethanol
    Eng Life Sci 2012, 12, 57-68

  152. Xue X, Li J, Wang W, Sztajer H, Wagner-Dobler I,
    The global impact of the delta subunit RpoE of the RNA polymerase on the proteome of Streptococcus mutans
    Microbiology 2012, 158, 191-206

  153. Chatzifragkou A, Aggelis G, Komaitis M, Zeng A-P, Papanikolaou S,
    Impact of anaerobiosis strategy and bioreactor geometry on the biochemical response of Clostridium butyricum VPI 1718 during 1,3-propanediol fermentation
    Bioresour Technol 2011, 102, 10625-10632

  154. Ma CW, Xiu ZL, Zeng A-P,
    A new concept to reveal protein dynamics based on energy dissipation
    PLoS One 2011, 6, e26453

  155. Sercinoglu O, Platas Barradas O, Sandig V, Zeng A-P, Pörtner R,
    DoE of fed-batch processes - model-based design and experimental evaluation
    BMC Proc 2011, 5 Suppl 8, P46

  156. Platas Barradas O, Jandt U, Da Minh Phan L, Villanueva M, Rath A, Reichl U, Schrader E, Scholz S, Noll T, Sandig V, et al,
    Criteria for bioreactor comparison and operation standardisation during process development for mammalian cell culture
    BMC Proc 2011, 5 Suppl 8, P47

  157. Schaletzky M, Platas Barradas O, Sievert H, Balabanov S, Zeng A-P, Pörtner R,
    Cultivation strategies of a BA/F3 cell line for fundamental cell research
    BMC Proc 2011, 5 Suppl 8, P48

  158. Platas Barradas O, Jandt U, Hass R, Kasper C, Sandig V, Pörtner R, Zeng A-P,
    Physical methods for synchronization of a human production cell line
    BMC Proc 2011, 5 Suppl 8, P49

  159. Schrader E, Scholz S, Niklas J, Rath A, Platas Barradas O, Jandt U, Sandig V, Rose T, Pörtner R, Reichl U, et al,
    Characterisation of cultivation of the human cell line AGE1.HN.AAT
    BMC Proc 2011, 5 Suppl 8, P87

  160. Stelzer M, Sun J, Kamphans T, Fekete SP, Zeng A-P,
    An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks
    Integr Biol (Camb) 2011, 3, 1071-1086

  161. Rujananon R, Prasertsan P, Phongdara A, Panrat T, Sun J, Rappert S, Zeng A-P,
    Construction of Recombinant E.coli Expressing Fusion Protein to Produce 1,3-Propanediol
    World Academy of Science, Engineering and Technology 2011, 52, 454 - 460

  162. Zeng A-P,
    New biotechnological production systems
    Biotechnol J 2011, 6, 907-908

  163. Chen Z, Rappert S, Sun J, Zeng A-P,
    Integrating molecular dynamics and co-evolutionary analysis for reliable target prediction and deregulation of the allosteric inhibition of aspartokinase for amino acid production
    J Biotechnol 2011, 154, 248-254

  164. Chen Z, Meyer W, Rappert S, Sun J, Zeng A-P,
    Co-evolutionary analysis enabled rational deregulation of allosteric enzyme inhibition in Corynebacterium glutamicum for lysine production
    Appl Environ Microbiol 2011, 77, 4352-4360

  165. Yu B, Sun J, Bommareddy RR, Song L, Zeng A-P,
    Novel (2R,3R)-2,3-butanediol dehydrogenase from potential industrial strain Paenibacillus polymyxa ATCC 12321
    Appl Environ Microbiol 2011, 77, 4230-4233

  166. Jandt U, Shao S, Wirth M, Zeng A-P,
    Spatiotemporal modeling and analysis of transient gene delivery
    Biotechnol Bioeng 2011, 108, 2205-2217

  167. Ma H-W, Zeng A-P,
    Modularity based Network Decomposition
    Encyclopedia of Systems Biology W. Dubitzky, O. Wolkenhauer, K. Cho & H. Yokota (eds.), Springer Science+Business Media, LLC 2012 2011

  168. Ma H-W, Zeng A-P,
    Top-down Network decomposition: methods for identifying modules in complex biological networks
    Encyclopedia of Systems Biology W. Dubitzky, O. Wolkenhauer, K. Cho & H. Yokota (eds.), Springer Science+Business Media, LLC 2012 2011

  169. Zeng A-P, Ma H-W,
    Encyclopedia of Systems Biology W. Dubitzky, O. Wolkenhauer, K. Cho & H. Yokota (eds.), Springer Science+Business Media, LLC 2012 2011

  170. Zeng A-P, Sabra W,
    Microbial production of diols as platform chemicals: recent progresses
    Curr Opin Biotechnol 2011, 22, 749-757

  171. Chatzifragkou A, Papanikolaou S, Dietz D, Doulgeraki AI, Nychas GJ, Zeng A-P,
    Production of 1,3-propanediol by Clostridium butyricum growing on biodiesel-derived crude glycerol through a non-sterilized fermentation process
    Appl Microbiol Biotechnol 2011, 91, 101-112

  172. Sabra W, Dai J-Y Quitmann H, Zeng A-P and Xiu Z-L,
    Microbial production of 2, 3-butanediol
    Comprehensive Biotechnology. Second edition, Vol. 3: Industrial Biotechnology and Commodity Products. Eds. Moreina and Bai 2011, 87-97

  173. Kaeding T, Tjahjasari D, Zeng A-P,
    1,3-Propanediol and Polytrimethyleneterephthalate
    Comprehensive Biotechnology. Vol. 3: Industrial Biotechnology and Commodity Products (eds. Moreina and Bai) 2011, 229-242

  174. Zeng A-P,
    Editorial: From systems biology to biosystems engineering
    Eng Life Sci 2010, 10, 380-381

  175. Sabra W, Dietz D, Tjahjasari D, Zeng A-P,
    Biosystems analysis and engineering of microbial consortia for industrial biotechnology
    Eng Life Sci 2010, 10, 407-421

  176. Chen Z, Wilmanns M, Zeng A-P,
    Structural synthetic biotechnology: from molecular structure to predictable design for industrial strain development
    Trends Biotechnol 2010, 28, 534-542

  177. Lu X, Sun J, Nimtz M, Wissing J, Zeng A-P, Rinas U,
    The intra- and extracellular proteome of Aspergillus niger growing on defined medium with xylose or maltose as carbon substrate
    Microb Cell Fact 2010, 9, 23

  178. Chatzifragkou A, Dietz D, Komaitis M, Zeng A-P, Papanikolaou S,
    Effect of biodiesel-derived waste glycerol impurities on biomass and 1,3-propanediol production of Clostridium butyricum VPI 1718
    Biotechnol Bioeng 2010, 107, 76-84

  179. Wurm M, Schöpke B, Lutz D, Muller J, Zeng A-P,
    Microtechnology meets systems biology: the small molecules of metabolome as next big targets
    J Biotechnol 2010, 149, 33-51

  180. Grote R, Schöpke B, Zeng A-P, Antranikian G,
    Biotransformationsreaktionen in Mikrosystemtechnik - Visionen für die Industrielle Biotechnik
    In: "Nach uns, ohne Öl: Auf dem Weg zu nachhaltiger Produktion" M Angrick (Ed),Metropolis-Verlag, Marburg 2010, 129-141

  181. Aydoğan Ö, Bayraktar E, Mehmetoğlu Ü, Kaeding T, Zeng A-P,
    Selection and optimization of an aqueous two-phase system for the recovery of 1,3-propandiol from fermentation broth
    Eng Life Sci 2010, 10, 121-129

  182. Bizukojc M, Dietz D, Sun J, Zeng A-P,
    Metabolic modelling of syntrophic-like growth of a 1,3-propanediol producer, Clostridium butyricum, and a methanogenic archeon, Methanosarcina mazei, under anaerobic conditions
    Bioprocess Biosyst Eng 2010, 33, 507-523

  183. He F, Balling R, Zeng A-P,
    Reverse engineering and verification of gene networks: principles, assumptions, and limitations of present methods and future perspectives
    J Biotechnol 2009, 144, 190-203

  184. Zeng A-P, Sun J,
    Continouous culture
    Manual of Industrial Microbiology and Biotechnology. 3nd. edition, R.H. Baltz, J.E. Davies and A. L. Demain (Eds.), American Society for Microbiology, Washington, D.C. 2009, 685-699

  185. Flipphi M, Sun J, Robellet X, Karaffa L, Fekete E, Zeng A-P, Kubiecek CP,
    Biodiversity and evolution of primary carbon metabolism in Aspergillus nidulans and other Aspergillus spp
    Fungal Genet Biol 2009, 46 Suppl 1, S19-S44

  186. Wortman JR, Gilsenan JM, Joardar V, Deegan J, Clutterbuck J, Andersen MR, Archer D, Bencina M, Braus G, Coutinho P, et al,
    The 2008 update of the Aspergillus nidulans genome annotation: a community effort
    Fungal Genet Biol 2009, 46 Suppl 1, S2-13

  187. Hilterhaus L, Minow B, Muller J, Berheide M, Quitmann H, Katzer M, Thum O, Antranikian G, Zeng A-P, Liese A,
    Practical application of different enzymes immobilized on sepabeads
    Bioprocess Biosyst Eng 2008, 31, 163-171

  188. Sun J, Zeng A-P,
    Systems Biotechnology
    2008 Report on the Development of Industrial Biotechnology Ed The Bureau of Life Science & Biotechnology, Chinese Academy of Sciences, Science Press, Beijing 2008

  189. Liu YH, Bi JX, Zeng A-P, Yuan JQ,
    A simple kinetic model for myeloma cell culture with consideration of lysine limitation
    Bioprocess Biosyst Eng 2008, 31, 569-577

  190. Xiu ZL, Zeng A-P,
    Present state and perspective of downstream processing of biologically produced 1,3-propanediol and 2,3-butanediol
    Appl Microbiol Biotechnol 2008, 78, 917-926

  191. da Silva MR, Hongwu M, An-Ping Z,
    Centrality, Network Capacity, and Modularity as Parameters to Analyze the Core-Periphery Structure in Metabolic Networks
    Proceedings of the IEEE 2008, 96, 1411-1420

  192. Liu Y-H, Bi J-X, Zeng A-P, Yuan J-Q,
    A cybernetic model to describe the dynamics of myeloma cell cultivations
    Applied Mathematics and Computation 2008, 205, 84-97

  193. Zhang Q, Teng H, Sun Y, Xiu Z, Zeng A,
    Metabolic flux and robustness analysis of glycerol metabolism in Klebsiella pneumoniae
    Bioprocess Biosyst Eng 2008, 31, 127-135

  194. Sun Y-Q, Qi W-T, Hu T, Xiu Z-L, Zeng A-P,
    Mathematical Modeling of Glycerol Fermentation by Klebsiella pneumoniae: Concerning Both Enzyme-Catalytic Reductive Pathway and Transport of Glycerol and 1,3-Propanediol Across Cell Membrane
    Biochem. Eng. J. 2008, 38, 22-32

  195. Ulmer C, Zeng A-P,
    Microbial production of 3-hydroxypropionaldehyde from glycerol bioconversion
    Chemical and Biochemical Engineering Quarterly 2007, 21, 321-326

  196. Zheng P, Sun J, Geffers R, Zeng A-P,
    Functional characterization of the gene PA2384 in large-scale gene regulation in response to iron starvation in Pseudomonas aeruginosa
    J Biotechnol 2007, 132, 342-352

  197. Liu YH, Bi JX, Zeng A-P, Yuan JQ,
    A population balance model describing the cell cycle dynamics of myeloma cell cultivation
    Biotechnol Prog 2007, 23, 1198-1209

  198. Pel HJ, de Winde JH, Archer DB, Dyer PS, Hofmann G, Schaap PJ, Turner G, de Vries RP, Albang R, Albermann K, et al,
    Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
    Nat Biotechnol 2007, 25, 221-231

  199. He F, Buer J, Zeng A-P, Balling R,
    Dynamic cumulative activity of transcription factors as a mechanism of quantitative gene regulation
    Genome Biol 2007, 8, R181

  200. Sun J, Lu X, Rinas U, Zeng A-P,
    Metabolic peculiarities of Aspergillus niger disclosed by comparative metabolic genomics
    Genome Biol 2007, 8, R182

  201. Silva MRd, Ma H, Sun J, He F, Zeng A-P,
    Metabolic network
    In B H Junker, F Schreiber (eds) Biological Network Analysis, Wiley 2007, 233-253

  202. Ma B, He F, Jablonska J, Winkelbach S, Lindenmaier W, Zeng A-P, Dittmar KE,
    Six-color segmentation of multicolor images in the infection studies of Listeria monocytogenes
    Microsc Res Tech 2007, 70, 171-178

  203. Zhou F, Bi J, Zeng A-P, Yuan J,
    A macrokinetic model for myeloma cell culture based on stoichiometric balance
    Biotechnol Appl Biochem 2007, 46, 85-95

  204. Li Y, Bi J, Zhou W, Huang Y, Sun L, Zeng A-P, Ma G, Su Z,
    Characterization of the large size aggregation of Hepatitis B virus surface antigen (HBsAg) formed in ultrafiltration process
    Process Biochemistry 2007, 42, 315-319

  205. Zhang Q, Xiu Z-L,, Zeng A-P,
    Optimization of microbial production of 1,3-propanediol by Klebsiella pneumoniae under anaerobic and microaerobic conditions by metabolic flux analysis
    Chem. Ind. Eng. 2006, 57, 1403-1409

  206. Wang W, Sun J, Hollmann R, Zeng A-P, Deckwer WD,
    Proteomic characterization of transient expression and secretion of a stress-related metalloprotease in high cell density culture of Bacillus megaterium
    J Biotechnol 2006, 126, 313-324

  207. Zheng P, Sun J, van den Heuvel J, Zeng A-P,
    Discovery and investigation of a new, second triose phosphate isomerase in Klebsiella pneumoniae
    J Biotechnol 2006, 125, 462-473

  208. Zeng A-P,
    Process Biochemistry 2006, 41, 2101-2102

  209. Zheng P, Wereath K, Sun J, van den Heuvel J, Zeng A-P,
    Overexpression of genes of the dha regulon and its effects on cell growth, glycerol fermentation to 1,3-propanediol and plasmid stability in Klebsiella pneumoniae
    Process Biochemistry 2006, 41, 2160-2169

  210. Zhou F, Bi J-X, Zeng A-P, Yuan J-Q,
    A macrokinetic and regulator model for myeloma cell culture based on metabolic balance of pathways
    Process Biochemistry 2006, 41, 2207-2217

  211. Sun J, Wang W, Hundertmark C, Zeng A-P, Jahn D, Deckwer WD,
    A protein database constructed from low-coverage genomic sequence of Bacillus megaterium and its use for accelerated proteomic analysis
    J Biotechnol 2006, 124, 486-495

  212. Deckwer WD, Jahn D, Hempel D, Zeng A-P,
    Systems Biology Approaches to Bioprocess Development
    Eng Life Sci 2006, 6, 455-469

  213. Deckwer WD, Hempel DC, Zeng A-P, Jahn D,
    Systembiotechnologische Ansätze zur Prozessentwicklung
    Chemie Ingenieur Technik 2006, 78, 193-208

  214. He F, Zeng A-P,
    In search of functional association from time-series microarray data based on the change trend and level of gene expression
    BMC Bioinformatics 2006, 7, 69

  215. Wee YJ, Yun JS, Lee YY, Zeng A-P, Ryu HW,
    Recovery of lactic acid by repeated batch electrodialysis and lactic acid production using electrodialysis wastewater
    J Biosci Bioeng 2005, 99, 104-108

  216. Buer J, Westendorf AM, Zeng A-P, He F, Hansen W, Probst-Kepper M,
    Mechanisms of Central and Peripheral T-Cell Tolerance: An Update
    Transfusion Medicine and Hemotherapy 2005, 32, 384-399

  217. Zhang F, Bi JX, Zeng A-P, Yuan JQ,
    A simple kinetic model for myeloma cell growth with lysin as a limiting substrate
    J of Shanghai Jiaotong University 2005, 139, 182-186

  218. Zeng A-P, Bi J,
    Cell Culture Kinetics and Modeling
    In: SS Ozturk and W-S Hu (eds) Cell Culture Technology for Pharmaceutical and Cellular Therapies Taylor & Francis Group, Atlanta 2005, 299-347

  219. Kumar B, Ma H, Zeng A-P,
    An integrated cellular network of Escherichia coli and its structural analysis
    Proceedings of Foundation of Systems Biology in Engineering University of California , Santa Babara , USA , August 7-10 2005, 107-110

  220. Sun J, Gunzer F, Westendorf AM, Buer J, Scharfe M, Jarek M, Gossling F, Blocker H, Zeng A-P,
    Genomic peculiarity of coding sequences and metabolic potential of probiotic Escherichia coli strain Nissle 1917 inferred from raw genome data
    J Biotechnol 2005, 117, 147-161

  221. Zeng A-P, Sun J, Wang W, Ma H, Deckwer W-D,
    Application of genomic and proteomic data for bioprocess analysis and optimisation
    In ST Yang (ed) Bioprocessing for value-added products from renewable resources Elservier Inc, USA 2005, 25-48

  222. Kim EJ, Wang W, Deckwer WD, Zeng A-P,
    Expression of the quorum-sensing regulatory protein LasR is strongly affected by iron and oxygen concentrations in cultures of Pseudomonas aeruginosa irrespective of cell density
    Microbiology 2005, 151, 1127-1138

  223. Ditges U, Hartmann M, Coldewey S, Ma H, Zeng A-P, Gunzer F,
    Acid resistance in enterohemorrhagic E-coli: Is there a link to the serotype ?
    International Journal of Medical Microbiology 2004, 294, 161-161

  224. Feng H, Hongwu M, Xueming Z, Yingjin Y, Anping Z,

    CIESC Journal 2004, 55, 1593-1601
  226. Ma HW, Buer J, Zeng A-P,
    Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach
    BMC Bioinformatics 2004, 5, 199

  227. Ma HW, Kumar B, Ditges U, Gunzer F, Buer J, Zeng A-P,
    An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs
    Nucleic Acids Res 2004, 32, 6643-6649

  228. Ma HW, Zeng A-P,
    Phylogenetic comparison of metabolic capacities of organisms at genome level
    Mol Phylogenet Evol 2004, 31, 204-213

  229. Ma HW, Zhao XM, Yuan YJ, Zeng A-P,
    Decomposition of metabolic network into functional modules based on the global connectivity structure of reaction graph
    Bioinformatics 2004, 20, 1870-1876

  230. Sun J, Daniel R, Wagner-Dobler I, Zeng A-P,
    Is autoinducer-2 a universal signal for interspecies communication: a comparative genomic and phylogenetic analysis of the synthesis and signal transduction pathways
    BMC Evol Biol 2004, 4, 36

  231. Sun J, Zeng A-P,
    IdentiCS--identification of coding sequence and in silico reconstruction of the metabolic network directly from unannotated low-coverage bacterial genome sequence
    BMC Bioinformatics 2004, 5, 112

  232. Xiu Z-L, Song B-H, Wang Z-T, Sun L-H, Feng E-M, Zeng A-P,
    Optimization of dissimilation of glycerol to 1,3-propanediol by Klebsiella pneumoniae in one- and two-stage anaerobic cultures
    Biochemical Engineering Journal 2004, 19, 189-197

  233. Zeng A-P, Kim E-J,
    Iron availability, oxygen limitation, Pseudomonas aeruginosa and cystic fibrosis
    Microbiology 2004, 150, 516-518

  234. Bi JX, Buhr P, Zeng A-P, Wirth M,
    Human c-fos promoter mediates high-level, inducible expression in various mammalian cell lines
    Biotechnol Bioeng 2003, 81, 848-854

  235. Kim EJ, Sabra W, Zeng A-P,
    Iron deficiency leads to inhibition of oxygen transfer and enhanced formation of virulence factors in cultures of Pseudomonas aeruginosa PAO1
    Microbiology 2003, 149, 2627-2634

  236. Ma H, Zeng A-P,
    Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms
    Bioinformatics 2003, 19, 270-277

  237. Ma HW, Zeng A-P,
    The connectivity structure, giant strong component and centrality of metabolic networks
    Bioinformatics 2003, 19, 1423-1430

  238. Qiao JJ, Yuan YJ, Zhao H, Wu JC, Zeng A-P,
    Apoptotic cell death in suspension cultures of Taxus cuspidata co-treated with salicylic acid and hydrogen peroxide
    Biotechnol Lett 2003, 25, 387-390

  239. Qiao JJ, Zhao H, Ge ZQ, Yuan YJ, Zeng A-P,
    [2-dimensional gel electrophoresis on protein patterns from suspension cultures of Taxus cuspidate induced by SA]
    Sheng Wu Gong Cheng Xue Bao 2003, 19, 92-96

  240. Sabra W, Lunsdorf H, Zeng A-P,
    Alterations in the formation of lipopolysaccharide and membrane vesicles on the surface of Pseudomonas aeruginosa PAO1 under oxygen stress conditions
    Microbiology 2003, 149, 2789-2795

  241. Sun J, van den Heuvel J, Soucaille P, Qu Y, Zeng A-P,
    Comparative genomic analysis of dha regulon and related genes for anaerobic glycerol metabolism in bacteria
    Biotechnol Prog 2003, 19, 263-272

  242. Wang W, Sun J, Hartlep M, Deckwer WD, Zeng A-P,
    Combined use of proteomic analysis and enzyme activity assays for metabolic pathway analysis of glycerol fermentation by Klebsiella pneumoniae
    Biotechnol Bioeng 2003, 83, 525-536

  243. Wang W, Sun J, Nimtz M, Deckwer WD, Zeng A-P,
    Protein identification from two-dimensional gel electrophoresis analysis of Klebsiella pneumoniae by combined use of mass spectrometry data and raw genome sequences
    Proteome Sci 2003, 1, 6

  244. Bi JX, Wirth M, Beer C, Kim EJ, Gu MB, Zeng A-P,
    Dynamic characterization of recombinant Chinese hamster ovary cells containing an inducible c-fos promoter GFP expression system as a biomarker
    J Biotechnol 2002, 93, 231-242

  245. Hartlep M, Hussmann W, Prayitno N, Meynial-Salles I, Zeng A-P,
    Study of two-stage processes for the microbial production of 1,3-propanediol from glucose
    Appl Microbiol Biotechnol 2002, 60, 60-66

  246. Ma Z-Y, Yuan Y-J, Wu J-C, Zeng A-P,
    Apoptotic cell death in suspension cultures of Taxus chinensis var. mairei
    Biotechnol Lett 2002, 24, 573-577

  247. Modak J, Deckwer WD, Zeng A-P,
    Metabolic control analysis of eucaryotic pyruvate dehydrogenase multienzyme complex
    Biotechnol Prog 2002, 18, 1157-1169

  248. Sabra W, Kim EJ, Zeng A-P,
    Physiological responses of Pseudomonas aeruginosa PAO1 to oxidative stress in controlled microaerobic and aerobic cultures
    Microbiology 2002, 148, 3195-3202

  249. Xiu ZL, Chang ZY, Zeng A-P,
    Nonlinear dynamics of regulation of bacterial trp operon: model analysis of integrated effects of repression, feedback inhibition, and attenuation
    Biotechnol Prog 2002, 18, 686-693

  250. Xiu Z-L, Song B-H, Sun L-H, Zeng A-P,
    Theoretical analysis of effects of metabolic overflow and time delay on the performance and dynamic behavior of a two-stage fermentation process
    Biochemical Engineering Journal 2002, 11, 101-109

  251. Yuan Y-J, Li C, Hu Z-D, Wu J-C, Zeng A-P,
    Fungal elicitor-induced cell apoptosis in suspension cultures of Taxus chinensis var. mairei for taxol production
    Process Biochemistry 2002, 38, 193-198

  252. Yuan Y-J, Ma Z-Y, Wu J-C, Zeng A-P,
    Taxol-induced apoptotic cell death in suspension cultures of Taxus cuspidata
    Biotechnol Lett 2002, 24, 615-618

  253. Zeng A-P, Biebl H,
    Bulk chemicals from biotechnology: the case of 1,3-propanediol production and the new trends
    Adv Biochem Eng Biotechnol 2002, 74, 239-259

  254. Zeng A-P, Modak J, Deckwer WD,
    Nonlinear dynamics of eucaryotic pyruvate dehydrogenase multienzyme complex: decarboxylation rate, oscillations, and multiplicity
    Biotechnol Prog 2002, 18, 1265-1276

  255. Sabra W, Zeng A-P, Deckwer WD,
    Bacterial alginate: physiology, product quality and process aspects
    Appl Microbiol Biotechnol 2001, 56, 315-325

  256. Yuan Y-J, Z.Y. M, Z.Q G, Z.Q. M, Zeng A-P,
    Apoptosis and taxol production in suspension cultures of Taxus spp. cells
    J Chem Ind Eng 2001, 51, 4

  257. Sabra W, Zeng A-P, Lunsdorf H, Deckwer WD,
    Effect of oxygen on formation and structure of Azotobacter vinelandii alginate and its role in protecting nitrogenase
    Appl Environ Microbiol 2000, 66, 4037-4044

  258. Xiu Z-L, Zeng A-P, An LJ, Deckwer W-D,
    Transient responses and mathematical modeling of Klebsiella pneumoniae to dilution rate and glycerol concentration step changes in continuous culture
    J Chemical Engineering of Chinese Universities 2000, 14, 53-58

  259. Zeng A-P, Linz M,
    Programmed cell death (apoptosis) in animal cell culture: physiological and kinetic aspects
    In: JJ Zhong (ed): Advances in Applied Biotechnology ECUST Press, Shanghai 2000, 64-77

  260. Biebl H, Menzel K, Zeng A-P, Deckwer WD,
    Microbial production of 1,3-propanediol
    Appl Microbiol Biotechnol 1999, 52, 289-297

  261. Brandt S, Zeng A-P, Deckwer WD,
    Adsorption capacity as a key parameter for enzyme induction and pentachlorophenol degradation in Mycobacterium chlorophenolicum PCP-1
    Biotechnol Bioeng 1999, 65, 93-99

  262. Sabra W, Zeng A-P, Sabry S, Omar S, Deckwer WD,
    Effect of phosphate and oxygen concentrations on alginate production and stoichiometry of metabolism of Azotobacter vinelandii under microaerobic conditions
    Appl Microbiol Biotechnol 1999, 52, 773-780

  263. Xiu ZL, Deckwer WD, Zeng A-P,
    Estimation of rates of oxygen uptake and carbon dioxide evolution of animal cell culture using material and energy balances
    Cytotechnology 1999, 29, 159-166

  264. Zeng A-P,
    Continuous culture
    In: Manual of Industrial Microbiology and Biotechnology 2nd edition, A L Demain and N A Solomon (Eds), American Society for Microbiology, Washington, DC 1999, 151-164

  265. Zeng A-P, Deckwer WD,
    Model simulation and analysis of perfusion culture of mammalian cells at high cell density
    Biotechnol Prog 1999, 15, 373-382

  266. Zhilong X, Anping Z,
    A Study Progress in Oscillatory and Chaotic Behavior in Microbial Continuous Cultures
    Progress in Biotechnology 1999, 58-63

  267. Ahrens K, Menzel K, Zeng A, Deckwer W,
    Kinetic, dynamic, and pathway studies of glycerol metabolism by Klebsiella pneumoniae in anaerobic continuous culture: III. Enzymes and fluxes of glycerol dissimilation and 1,3-propanediol formation
    Biotechnol Bioeng 1998, 59, 544-552

  268. Biebl H, Zeng A-P, Menzel K, Deckwer WD,
    Fermentation of glycerol to 1,3-propanediol and 2,3-butanediol by Klebsiella pneumoniae
    Appl Microbiol Biotechnol 1998, 50, 24-29

  269. Menzel K, Ahrens K, Zeng A, Deckwer W,
    Kinetic, dynamic, and pathway studies of glycerol metabolism by Klebsiella pneumoniae in anaerobic continuous culture: IV. Enzymes and fluxes of pyruvate metabolism
    Biotechnol Bioeng 1998, 60, 617-626

  270. Wittmann C, Zeng A-P, Deckwer WD,
    Physiological characterization and cultivation strategies of the pentachlorophenol-degrading bacteria Sphingomonas chlorophenolica RA2 and Mycobacterium chlorophenolicum PCP-1
    Journal of Industrial Microbiology and Biotechnology 1998, 21, 315-321

  271. Xiu ZL, Zeng A-P, Deckwer WD,
    Multiplicity and stability analysis of microorganisms in continuous culture: effects of metabolic overflow and growth inhibition
    Biotechnol Bioeng 1998, 57, 251-261

  272. Zeng A-P, Deckwer WD,
    88. Neue Ansätze zur Modellierung, Regelung und Überwachung tierischer Zellkulturen
    Chemie Ingenieur Technik 1998, 70, 1127-1128

  273. Zeng A-P, Deckwer WD, Hu WS,
    Determinants and rate laws of growth and death of hybridoma cells in continuous culture
    Biotechnol Bioeng 1998, 57, 642-654

  274. Zeng A-P, Hu WS, Deckwer WD,
    Variation of stoichiometric ratios and their correlation for monitoring and control of animal cell cultures
    Biotechnol Prog 1998, 14, 434-441

  275. Brandt S, Zeng A-P, Deckwer WD,
    3.0.CO;2-8>Adsorption and desorption of pentachlorophenol on cells of Mycobacterium chlorophenolicum PCP-1
    Biotechnol Bioeng 1997, 55, 480-489

  276. Linz M, Zeng A-P, Wagner R, Deckwer WD,
    Stoichiometry, kinetics, and regulation of glucose and amino acid metabolism of a recombinant BHK cell line in batch and continuous cultures
    Biotechnol Prog 1997, 13, 453-463

  277. Menzel K, Zeng A-P, Deckwer WD,
    Enzymatic evidence for an involvement of pyruvate dehydrogenase in the anaerobic glycerol metabolism of Klebsiella pneumoniae
    J Biotechnol 1997, 56, 135-142

  278. Menzel K, Zeng A-P, Deckwer WD,
    High concentration and productivity of 1,3-propanediol from continuous fermentation of glycerol by Klebsiella pneumoniae
    Enzyme and Microbial Technology 1997, 20, 82-86

  279. Xiu Z-L, Zeng A-P, Deckwer W-D,
    Model analysis concerning the effects of growth rate and intracellular tryptophan level on the stability and dynamics of tryptophan biosynthesis in bacteria
    J Biotechnol 1997, 58, 125-140

  280. Menzel K, Zeng A-P, Biebl H, Deckwer WD,
    3.0.CO;2-J>Kinetic, dynamic, and pathway studies of glycerol metabolism by Klebsiella pneumoniae in anaerobic continuous culture: I. The phenomena and characterization of oscillation and hysteresis
    Biotechnol Bioeng 1996, 52, 549-560

  281. Zeng A-P,
    3.0.CO;2-H>Mathematical modeling and analysis of monoclonal antibody production by hybridoma cells
    Biotechnol Bioeng 1996, 50, 238-247

  282. Zeng A-P,
    Quantitative assessment of effect of cell density on metabolism and monoclonal antibody production of hybridoma cells
    J Biotechnol 1996, 45, 243-251

  283. Zeng A-P,
    Pathway and kinetic analysis of 1,3-propanediol production from glycerol fermentation by Clostridium butyricum
    Bioprocess Engineering 1996, 14, 169-175

  284. Zeng A-P, Menzel K, Deckwer WD,
    3.0.CO;2-H>Kinetic, dynamic, and pathway studies of glycerol metabolism by Klebsiella pneumoniae in anaerobic continuous culture: II. Analysis of metabolic rates and pathways under oscillation and steady-state conditions
    Biotechnol Bioeng 1996, 52, 561-571

  285. Zeng A-P, Deckwer W-D,
    Bioreaction techniques under low oxygen tension and oxygen limitation: from molecular level to pilot plant reactor
    Chemical Engineering Science 1996, 51, 2305-2314

  286. Solomon BO, Zeng A-P, Biebl H, Schlieker H, Posten C, Deckwer WD,
    Comparison of the energetic efficiencies of hydrogen and oxychemicals formation in Klebsiella pneumoniae and Clostridium butyricum during anaerobic growth on glycerol
    J Biotechnol 1995, 39, 107-117

  287. Wittmann C, Zeng A-P, Deckwer WD,
    Growth inhibition by ammonia and use of a pH-controlled feeding strategy for the effective cultivation of Mycobacterium chlorophenolicum
    Appl Microbiol Biotechnol 1995, 44, 519-525

  288. Zeng A-P,
    A new balance equation of reducing equivalents for data consistency check and bioprocess calculation
    J Biotechnol 1995, 43, 111-124

  289. Zeng A-P,
    A kinetic model for product formation of microbial and mammalian cells
    Biotechnol Bioeng 1995, 46, 314-324

  290. Zeng A-P,
    Effect of CO2 absorption on the measurement of CO2 evolution rate in aerobic and anaerobic continuous cultures
    Appl Microbiol Biotechnol 1995, 42, 688-691

  291. Zeng A-P, Deckwer WD,
    Mathematical modeling and analysis of glucose and glutamine utilization and regulation in cultures of continuous mammalian cells
    Biotechnol Bioeng 1995, 47, 334-346

  292. Zeng A-P, Deckwer WD,
    A kinetic model for substrate and energy consumption of microbial growth under substrate-sufficient conditions
    Biotechnol Prog 1995, 11, 71-79

  293. Zeng A-P, Menzel K, Biebl H, Deckwer W-D,
    Analysis of oscillation and hysteresis in continuous fermentation of glycerol by K. pneumoniae
    In RD Schmid (ed) Biochemical Engineering 1995, 3, 174-177

  294. A.-P. Zeng PG, W.-D. Deckwer,
    Bioenergetic concepts applied to the modelling of a microaerobic process
    In TK Ghose (ed) Process Computations in Biotechnology 1994, II, 376-394

  295. Byun TG, Zeng A-P, Deckwer WD,
    Reactor comparison and scale-up for the microaerobic production of 2,3-butanediol by Enterobacter aerogenes at constant oxygen transfer rate
    Bioprocess Engineering 1994, 11, 167-175

  296. Solomon BO, Zeng A-P, Biebl H, Ejiofor AO, Posten C, Deckwer WD,
    Effects of substrate limitation on product distribution and H2/CO2 ratio inKlebsiella pneumoniae during anaerobic fermentation of glycerol
    Appl Microbiol Biotechnol 1994, 42, 222-226

  297. Wittmann C, Zeng A-P, Deckwer W-D,
    Minimal nutrient requirement for growth ofMycobacterium chlorophenolicum
    Biotechnol Lett 1994, 16, 1103-1106

  298. Zeng A-P, Byun TG, Posten C, Deckwer WD,
    Use of respiratory quotient as a control parameter for optimum oxygen supply and scale-up of 2,3-butanediol production under microaerobic conditions
    Biotechnol Bioeng 1994, 44, 1107-1114

  299. Zeng A-P, Ross A, Biebl H, Tag C, Gunzel B, Deckwer WD,
    Multiple product inhibition and growth modeling of clostridium butyricum and klebsiella pneumoniae in glycerol fermentation
    Biotechnol Bioeng 1994, 44, 902-911

  300. Zeng A-P, Deckwer W-D,
    Pathway analysis of oxygen utilization and tricarboxylic acid cycle activity in Saccharomyces cerevisiae growing on glucose
    J Biotechnol 1994, 37, 67-77

  301. Zeng A-P, Biebl H, Schlieker H, Deckwer WD,
    Pathway analysis of glycerol fermentation by Klebsiella pneumoniae: Regulation of reducing equivalent balance and product formation
    Enzyme and Microbial Technology 1993, 15, 770-779

  302. A.-P. Zeng T-GB, W.-D. Deckwer,
    Die Ausnutzung des Tricarbonsäurezyklus: Eine wichtige Kenngröße zur Führung mikroaerober Prozesse
    Chem-Ing-Tech 1992, 64, 731-734

  303. Zeng A-P, Deckwer WD,
    Utilization of the tricarboxylic acid cycle, a reactor design criterion for the microaerobic production of 2,3-butanediol
    Biotechnol Bioeng 1992, 40, 1078-1084

  304. Zeng A-P, Biebl H, Deckwer WD,
    Production of 2,3-butanediol in a membrane bioreactor with cell recycle
    Appl Microbiol Biotechnol 1991, 34, 463-468

  305. Zeng A-P, Byun TG, Deckwer WD,
    On-line estimation of viable biomass of a microaerobic culture using exit gas analysis
    Biotechnology Techniques 1991, 5, 247-250

  306. Zeng A-P, Deckwer W-D,
    A model for multiproduct-inhibited growth of Enterobacter aerogenes in 2,3-butanediol fermentation
    Appl Microbiol Biotechnol 1991, 35, 01.03.2014

  307. Zeng A-P, Ross A, Deckwer WD,
    A method to estimate the efficiency of oxidative phosphorylation and biomass yield from atp of a facultative anaerobe in continuous culture
    Biotechnol Bioeng 1990, 36, 965-969

  308. Zeng A-P, Biebl H, Deckwer W-D,
    2,3-Butanediol production by Enterobacter aerogenes in continuous culture: role of oxygen supply
    Appl Microbiol Biotechnol 1990, 33, 264-268

  309. Zeng A-P, Biebl H, Deckwer W-D,
    Effect of pH and acetic acid on growth and 2,3-butanediol production of Enterobacter aerogenes in continuous culture
    Appl Microbiol Biotechnol 1990, 33, 485-489

B. Books/Monographs/Theses

5. A.-P. Zeng (ed.) (2013) Fundamentals and application of new bioproduction systems. Adv Biochem Engin/Biotechnol, Springer-Verlag, Berlin (in print).

4. K. Schügerl and A.-P. Zeng (Eds.) (2002) Tools and Applications of Biochemical Engineering Science. Volume 74. Advances in Biochemical Engineering/Biotechnology. Springer-Verlag, Heidelberg.

3. Habilitationschrift (2000) Quantitative Zellphysiologie, Metabolic Engineering und Modellierung der Glycerinfermentation zu 1,3-Propandiol. Technische Universität Braunschweig.

2. A.-P. Zeng (1999) Sections Upstream Processing, Products and Processes (over 50 pages) in the Encyclopaedia "Römpp Lexikon Biotechnologie/Gentechnik", 2nd Edition, (Eds.) W.-D. Deckwer, A. Pühler, R.D Schmid, Thieme Verlag, Stuttgart.

1. Ph.D. Thesis (1990) Mikrobielle Produktion von 2,3-Butandiol durch Enterobacter aerogenes in kontinuierlicher Kultur: Quantitative Analyse und Prozessoptimierung. Technische Universität Braunschweig.

C. Proceedings and Extended Conference Abstracts

1. B. Kumar, M. D'Silva and A.-P. Zeng (2007) Modularity analysis of integrated molecular networks of Escherichia coli. Proceedings of the 2nd. Conference Foundations of systems Biology in Engineering. Stuttgart, Germany. Pp. 89-94.

2. Bharani Kumar, Hong-Wu Ma and>A.-P. Zeng (2005) An integrated interaction network of Escherichia Coli.  Proceedings FOSBE 2005 (Foundations of systems Biology in Engineering), University of California , Santa Barbara, August 7-10. pp 107-110.

3. A.-P. Zeng , Sun J, Wang W, Hartlep M, Deckwer WD.: Use of genomic, proteomic and metabolic data and mathematic modeling for a system analysis of glycerol bioconversion to 1,3-propanediol . In  Proceedings of 3rd International Conference on Systems Biology. E. Aurell, J. Elf and J. Jeppsson, editors. Karolinska Institutet, Stockholm. 2002: 54-55.

4. W. Wang, J. Sun, M. Hartlep, A.-P. Zeng und W.-D. Deckwer (2002) Proteomics und Bioinformatik-Tools zur Prozessanalyse  der 1,3-Propandiolproduktion in Klebsiella pneumoniae. Chem.-Ing. Tech. 74, 704.

5. M. Hartlep und A.-P. Zeng (2002) Fedbatch-Verfahren für die mikrobielle Herstellung von 1,3-Propandiol in Klebsiella pneumoniae und Clostridium butyricum. Chem.-Ing. Tech. 74, 663.

6. J.-X. Bi, C. Beer, M. Wirth und  A.-P. Zeng (2002) Entwicklung und dynamische Analyse von GFP-Expressionsystemen als Biomarker für die Genexpression in verschiedenen Animalzelllinien. Chem.-Ing. Tech. 74, 693.

7. W. Sabra, H. Ma, W. Wang, E.-J. Kim und A.-P. Zeng (2002) Rekonstruktion und Simulation des metabolischen Netzwerks von Pseudomonas aeruginosa für die Bildung von Virulenzfaktoren. Chem.-Ing. Tech. 74, 688.

8. A.-P. Zeng , Ma HW.: System structure analysis of metabolic networks constructed from genome data. In  Proceedings of 3rd International Conference on Systems Biology. E. Aurell, J. Elf and J. Jeppsson, editors. Karolinska Institutet, Stockholm. 2002: 238-239.

9. Sun, J, van den Heuvel, J and A.-P. Zeng (2001) Reconstruction of metabolic and regulatory networks of Klebsiella pneumoniae from genome data. Proceedings of the German Conference on Bioinformatics. E. Wingender, R. Hofestädt and I. Liebich (Eds.), Braunschweig, pp: 227-228.

10. K. Jung, A.-P. Zeng and W.-D. Deckwer (2000) Physiologische und enzymatische Charakterisierung der 1,3-Propandiol-Gewinnung aus Glycerin mit Clostridium butyricum. In: Schriftenreihe " Nachwachsende Rohstoffe" Band 15: Biokonversion nachwachsender Rohstoffe. Landwirtschaftsverlag, Münster. pp: 244-252.

11. J. Modak, W.-D. Deckwer and A.-P. Zeng (2000) System Dynamic Behavior of Eucaryotic Multienzyme Pyruvate Dehydrogenase Complex under In Vivo Conditions. Proceedings of the First International Conference of Systems Biology, 14-16 November 2000, Tokyo .

12. A.-P. Zeng and W.-D. Deckwer (1997) Recent progress in the study of Stoichiometry, Kinetics and Regulation of Metabolism and Growth of Animal Cell Cultures. In: Z. Shen, F. Ouyang, J.T. Yu and Z.A. Cao (eds.) Biochemical Engineering: Marching toward the Century of Biotechnoilogy.Tsinghua University Press, Beijing .  146-152.

13. A.-P. Zeng , K. Menzel, K. Ahrens, H. Biebl, J. van den Heuvel and W.-D. Deckwer (1997) Quantification of metabolic pathways and fluxes for metabolic engineering of glycerol conversion to 1,3-propanediol. In: Z. Shen, F. Ouyang, J.T. Yu and Z.A. Cao (eds.) Biochemical Engineering: Marching toward the Century of Biotechnoilogy.Tsinghua University Press, Beijing . 267-271.

14. H. Biebl and A.-P. Zeng (1995) Role of pH and limiting factors in the glycerol fermentation of Klebsiella pneumoniae. Proceedings of Ninth Forum for Applied Biotechnology. Gent , Belgium , September 27-29, 1995 . pp 1927-1932.

15. A.-P. Zeng , R. Wagner, V. Jäger, B. Anspach, U. Rinas and W.-D. Deckwer (1994) Integrated bioprocess development. In: Teo, W.K., Yap , M.G.S. and Oh, S.K.W. (eds.) Better living through innovative biochemical engineering. Continental Press , Singapore : 364-368.

16. A.-P. Zeng , A. Ross and W.-D. Deckwer (1990) A method to estimate the P/O ratio and YATP of a facultative anaerobe in continuous culture. In: Reuss/Knackmuss/Chmiel/Gilles (eds.) Biochemical Engineering - Stuttgart, Gustav Fischer Verlag. 1990, pp: 381-384.